Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1846 ATGATCATTCAGGAAGAAGAAAGAACTGTCATAACGGCCAAGGAACAAGAACATCCAAGTGAAGTGATGACCAGAGACAACCCAGAAGAGTGGTTGAACTTGAGCTTAGGAGGTACTAGTACTCCAGTCTCAACAGCAGCAGGAGACGCTGATTCGCAATCATCAAGATCAGCAGGTACCACCAAACTGTTTTCGTGCAACTTCTGCATGAGGAAGTTTTTCAGTTCACAAGCATTAGGAGGTCATCAGAACGCCCACAAAAGGGAAAGAGGAGCTGCGAGAAGATGCCAGTCTCAGAAGATGATGACGATGATGGGCTTGCCCTTCAACTCTCCCATTCTTCGAAAACTTGGCGTGCAGCCCCATTCACTTGTGCACAAGCCATGCCGAGGTGGAAGTGGAGCTACAATTGCGGCGCCGGCGAGCTTTCATGATGCATATGCAGGGCTTGGAATGGCTCCGTGGGCAGTTCCTTTCATGGGTGAGGATCAAACGGATCTGGTGTGGCCAGGTAGCTTCCGTTTGGATCCAAAACAACCAGAGCCACCCCAAGAATCACACAAGCTTGATTTAGACCTCAGTCTCTGA 588 0.4949 MIIQEEERTVITAKEQEHPSEVMTRDNPEEWLNLSLGGTSTPVSTAAGDADSQSSRSAGTTKLFSCNFCMRKFFSSQALGGHQNAHKRERGAARRCQSQKMMTMMGLPFNSPILRKLGVQPHSLVHKPCRGGSGATIAAPASFHDAYAGLGMAPWAVPFMGEDQTDLVWPGSFRLDPKQPEPPQESHKLDLDLSL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1846 195 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Glsi03g1846 195 MobiDBLite consensus disorder prediction 1 58 - -
Glsi03g1846 195 PANTHER ZINC FINGER PROTEIN 4-LIKE 12 195 - -
Glsi03g1846 195 MobiDBLite consensus disorder prediction 33 58 - -
Glsi03g1846 195 MobiDBLite consensus disorder prediction 180 195 - -
Glsi03g1846 195 Gene3D Classic Zinc Finger 45 106 - -
Glsi03g1846 195 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 91 IPR013087 -
Glsi03g1846 195 MobiDBLite consensus disorder prediction 175 195 - -
Glsi03g1846 195 MobiDBLite consensus disorder prediction 1 25 - -
Glsi03g1846 195 SUPERFAMILY beta-beta-alpha zinc fingers 61 90 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1846 Glsi-ChrGlsi03 80236632 80237219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1846 51 183 C2H2 Transcription Factor Family AT1G24625 38.406 1.30e-20 83.6