Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1838 ATGCTACGTTTGTGCTGCAGGCCGCTCGAGCGGTGTTTCGGACGGCGAGGTTGCTGCGGCGGCGGCGGCGGCGATGGACTTCTCTGGCATACGGACTTGAAGCCTCACGCCTCCGGATACTTCTCAATCGCCGTTGCTCAAGCCAATTACAATCTCGAAGATCAGAGCCAAGTCTTCACGTCTCCTTCCGCCACCTACGTCGGTGTCTATGATGGCCATGGCGGACCCGAAGCTTCTAGATTCGTCAACAAGCGTCTATTTCCTCATTTGCAGAAATTTGCTTCTGAACAAGGGGGATTGTCGGTGGATGTGATAAAAAAGGCATTTAAGGCCACTGAGGAGGAATTTTTGCATTTGGTGAAGCGATCATTGCCCTTCAGTCCCCAAATTGCTTCAGTAGGATCGTGCTGTCTTCTCGGTGCAATTTCTGATAATGTATTGTATGTTGCAAACCTTGGAGACTCTAGAGCAGTTCTTGGCCGGAGAGATCCAGAGAGCAAGAAATGTCCAGTGGTGGCAGAGCGGCTGTCAACTGATCATAATGTTGCTGTCGAGGAGGTGAGGAGAGAGGTGGAAGCCCTCCATCCTGATGATTCACACGTTGTGGTTTATACCCGCGGAGTTTGGAGGATTAAGGGCATCATACAGGTGTCAAGATCAATTGGTGATGTGTATCTCAAGAGACCTGATTTTTACAGAGACCCAGTTTTTCAGCAATTTGGAAACCCTGTTCCTTTGAAGCGTCCTGTAATGACAGCTGAACCATCAGTCCTTATTAGGGAGCTTGAACCTGAAGATTTATTCCTGATATTTGCATCAGATGGTCTTTGGGAACAATTAAGTGATGAAGTGGCAGTTGAGATTGTTTTCAAACATCCAAGAGCTGGAATTGCCAAGAGATTGGTGAGAGCTGCTCTACAGGAAGCTGCAAAGAAGAGAGAGATGAGATATGCTGACATAAAGAAAATTGACAAGGGAATAAGAAGACATTTCCATGATGATATCACTGTTATTGTTATCTATCTTGATCACCAGAGGGGCTCCTCTGATGATAGATTTAAGCAAAGTGCTGTTGGCTGCACGAGAGCCCCTGTGGATATTTTCTCCCTAAATGCTGATGAGGCAGAAAAGAGTATGCTTGGTGCAGTTGCTTAA 1155 0.4684 MLRLCCRPLERCFGRRGCCGGGGGDGLLWHTDLKPHASGYFSIAVAQANYNLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKRLFPHLQKFASEQGGLSVDVIKKAFKATEEEFLHLVKRSLPFSPQIASVGSCCLLGAISDNVLYVANLGDSRAVLGRRDPESKKCPVVAERLSTDHNVAVEEVRREVEALHPDDSHVVVYTRGVWRIKGIIQVSRSIGDVYLKRPDFYRDPVFQQFGNPVPLKRPVMTAEPSVLIRELEPEDLFLIFASDGLWEQLSDEVAVEIVFKHPRAGIAKRLVRAALQEAAKKREMRYADIKKIDKGIRRHFHDDITVIVIYLDHQRGSSDDRFKQSAVGCTRAPVDIFSLNADEAEKSMLGAVA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1838 384 ProSiteProfiles PPM-type phosphatase domain profile. 37 342 IPR001932 -
Glsi03g1838 384 PANTHER PROTEIN PHOSPHATASE 38 341 IPR015655 GO:0004722|GO:0006470
Glsi03g1838 384 Pfam Protein phosphatase 2C 62 311 IPR001932 -
Glsi03g1838 384 CDD PP2Cc 53 342 IPR001932 -
Glsi03g1838 384 SMART PP2C_4 30 340 IPR001932 -
Glsi03g1838 384 FunFam Probable protein phosphatase 2C 42 31 350 - -
Glsi03g1838 384 SUPERFAMILY PP2C-like 42 343 IPR036457 -
Glsi03g1838 384 Gene3D - 32 352 IPR036457 -
Glsi03g1838 384 ProSitePatterns PPM-type phosphatase domain signature. 66 74 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1838 Glsi-ChrGlsi03 80179533 80181991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1838 22 349 PP2C-type Phosphatase Gene Family AT3G51370 57.738 9.82e-145 414