Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1829 ATGAGCTGCAACGGTTGTCGTGTGCTGCGAAAAGGTTGCAATGAGGAGTGCATGCTCCGACATTGCCTAGAGGGAATAGAGAACCCACAAGCACAAGCCCACGCCACCGTCTTCGTCGCCAAGTTCTTCGGCCGTGCCGCTCTCATGTCTTTCCTTTCCTCTGTTCCCTCCCACCAACGATCCGCCTTGTTTCGGTCACTTTTGTATGAAGCAGTGGGACGTACCATAAATCCGGTGAATGGAGCAGTGGGGCTGCTTTGGACTGGCAACTGGCACCTCTGCCAGTTAGCGGTGGAGAAAGTGCTCCGAGGTGGCACCTTGACCCCGCTCCCTGAGTTCTTCGGCAGAGCTTCGGTCCCGACGGCGGAGGACGAGGGGTTTGGATCCGTTGTAGACTGTTCTAGTCATCGAGACACGGGTTCGGGATCGAGGACGTCGTTGAAGAGAAAGGTTCGTTGGGACGACGTGGAGAATTTTCAAGGACTACAAGATCGGTGCTTAGGCTTAGGGAGATCGTGTTTGCCGGAGAAAGTGGTGGTGGCTGGCGGTGGACGGAGTTACCAAGCAAAGGACGAGCACCGAGCAGCGACACCCTCCGAGGAATCTGAAACGTCGACGTTGGGGAGTAGCGCATTGCAATGTGGTGAAAACGGTTGTACTGAAAGAAAGCTCCTTAAGCTATTCTTCTAG 690 0.5493 MSCNGCRVLRKGCNEECMLRHCLEGIENPQAQAHATVFVAKFFGRAALMSFLSSVPSHQRSALFRSLLYEAVGRTINPVNGAVGLLWTGNWHLCQLAVEKVLRGGTLTPLPEFFGRASVPTAEDEGFGSVVDCSSHRDTGSGSRTSLKRKVRWDDVENFQGLQDRCLGLGRSCLPEKVVVAGGGRSYQAKDEHRAATPSEESETSTLGSSALQCGENGCTERKLLKLFF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1829 229 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Glsi03g1829 229 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Glsi03g1829 229 MobiDBLite consensus disorder prediction 185 211 - -
Glsi03g1829 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1829 Glsi-ChrGlsi03 80122153 80123203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1829 1 125 AS2 family AT3G49940 68.750 4.31e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi03g1829 LOB 4.3e-26 No_clan