Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1803 ATGTCTCCGTCGCCGAACTATTCCGCTGCTGTTAGCTTGTTATGCGGCGAGGATGCTGGCGAAGTGGTCTCCGACACATCGATCTCCGGCGACCACCATTCTTCGTCGTTGTATCTTCCTCCCTATTCTCCGCCGTCCGATGAGGCGACCATCGGTGGACTCATCGATGTAGAGACCCATCACATGCCCGACCCAGATTATCTGCAGCGCTGCCGTTGCCGTTCAATCGACGTCGAAGCTCGCCAAGACTCTATCGACTGGATCTTAAAGGTGCACGCATATTATGAGTTTCGACCAGTAACGGCGTTTCTCTGCGTCAACTACTTCGATCGTTTTCTGTCGTGCTCGTCACTTCCGCTACCTAGCAGGTGGCCGTTTCAGCTACTGTCAGTGGCTTGCTTGTCTTTAGCGGCGAAAATGGAGGAGCCGCAAGTCCCACTCTTGCTGGACCTGCAATTATTCGAACCCAGATTCGTATTCGAACCCAGGACCATTCAGAGAATGGAGCTCCGGGTCATGGCCAATCTCCGCTGGAGATTACGCTCCGTAACGCCTTTTGATTACCTCGACTACTTCATCTCCAAGCTCCCTTCTTCCTCCAGCCCTCAATCCGAATCCACAAACCGGTTCTTCTCAGCTGCCTCTGACCTCATCCTCGGCACCACCCGAGTGATTGATTTCTCGCGTTTTCCGCCGTCGGCAATAGCAGCTGCCGCCGTGCTCTGTTCAAGTGGCCAGGGCCAATCGCCGCCGTGTTTTCATGACAGAGTAAACAAAGAAATGGCGAGAAGCTGTCACCAACTAATGGAGGAATATGCGGTGGACACGTGTCCCTGTAAATGCCGGAGTGCCGAGGCTGTACCATCTTCGAGCCCCATCGGCGTGCTCGACGCCGCTACTTGTGAGAGCTGGGACACACGTTCCGAGAACCCAGGGTCAAGCGGCCAAGCCGAGCCGCCCAACAAGCGGCTGCGATCGGCCGGTCCGGATGAGCAGCAGAACCAGTGA 1008 0.5565 MSPSPNYSAAVSLLCGEDAGEVVSDTSISGDHHSSSLYLPPYSPPSDEATIGGLIDVETHHMPDPDYLQRCRCRSIDVEARQDSIDWILKVHAYYEFRPVTAFLCVNYFDRFLSCSSLPLPSRWPFQLLSVACLSLAAKMEEPQVPLLLDLQLFEPRFVFEPRTIQRMELRVMANLRWRLRSVTPFDYLDYFISKLPSSSSPQSESTNRFFSAASDLILGTTRVIDFSRFPPSAIAAAAVLCSSGQGQSPPCFHDRVNKEMARSCHQLMEEYAVDTCPCKCRSAEAVPSSSPIGVLDAATCESWDTRSENPGSSGQAEPPNKRLRSAGPDEQQNQ 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1803 335 FunFam D2/4-type cyclin 64 178 - -
Glsi03g1803 335 SUPERFAMILY Cyclin-like 51 180 IPR036915 -
Glsi03g1803 335 Gene3D - 54 250 - -
Glsi03g1803 335 SMART cyclin_7 86 174 IPR013763 -
Glsi03g1803 335 PANTHER CYCLINS 56 274 IPR039361 -
Glsi03g1803 335 FunFam D6-type cyclin 179 267 - -
Glsi03g1803 335 CDD CYCLIN_AtCycD-like_rpt2 183 269 - -
Glsi03g1803 335 ProSitePatterns Cyclins signature. 81 112 IPR006671 -
Glsi03g1803 335 Pfam Cyclin, N-terminal domain 55 180 IPR006671 -
Glsi03g1803 335 MobiDBLite consensus disorder prediction 303 335 - -
Glsi03g1803 335 Pfam Cyclin, C-terminal domain 183 273 IPR004367 -
Glsi03g1803 335 Gene3D - 64 181 - -
Glsi03g1803 335 MobiDBLite consensus disorder prediction 303 320 - -
Glsi03g1803 335 SMART Cyclin_C_2 183 290 IPR004367 -
Glsi03g1803 335 CDD CYCLIN_AtCycD-like_rpt1 80 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1803 Glsi-ChrGlsi03 79974974 79976567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1803 4 276 Core Cell Cycle Gene Families AT1G70210 43.110 5.03e-70 220