Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1798 ATGCTAGCAGCTGCTGTTAATATACATCATAAGCACGAGATGAGAAACATGGCACCACCAACACTACCACCTTATCAGTTGTTTTGGTGCTTCATTCTTCTTCTTCTTCTTCTGCCTCTTTCCAACTCAGTTGCGTCCCAAACCATTGTCAAAAGCTTACCTGGTTTCTCCGGGGAGCTACCTTTCCTGCTTGAAACAGGGTACATTGGGGTAGGAGAACTAGACGAGGTTCAGCTGTTTTATTACTTTTTTGAATCAGAGCAGAATCCAAAAGATGACCCTCTTGTGCTTTGGCTTCCCAGTGGTCCTGGTTGTTCTGCTCTCTCGGCAATCATGTACGAAATAGGTCCATTAAGTTTCAACTATAAGAGTTCTAGCGGAGACAAACCAGTTTTAGCGTTGAACGAGTACTCATGGACTAAGTGGCTTCTCGCTCATTCTCAGTTTCAGACAAACCAAGTTTACATTGCTGGCGATTCTTATTCTGGCATCACAGTACCAACCCTTGTCAAGAAAATTTTAGACGGTCAAGAAGCTGGAAATTTTCCTGAAATAAATCTCGAAGGTTATGTTCTGGGAAACCCATTCACTGATGTCTACTACGATGTAAACTCTAGAATTAAGTTTGCCCACAGACTTGCACTTCTATCCGACGAACTCTATGAGGACTACGACTACGTGTTCGTGAACATTTGGGCAAATGACATAGCAGTACAAGAAGCTCTCAACGTTAGAAATGGAACTATAACCCAGTGGGAGAGGTGCAATAAGAGCTTGTCTTATGAGTTTGACATAGAAAGTAGCGTTAAGTATCACAAGAACTTCACCAATACAGATCTCAGAGCTCTGGTTTACAGTGGAGATCATGATCTGATCATTCCACATGTGGGCACAGAAGAATGGATAGAATCTTTGAATTTGACTGTTTCTGCTGATTATGATGAATGGAGGCCATGGTATTTTGATGGACAAGTTGCAGGGTCACAGAGCTCCAGAATACAAGCCCGAGGAAAGCTATTTCATGATTGCTTCAGAAAAAAGCTAATCTGGGATAGGCACAGAAACCTTTTTCCTATGAGGGGTCATCAACCCGACACGTCAAAGTCCGGTCTTCCTGCAAATGAAGATGACCCAGATGTAACCCGACCCACATCCGCCGCTATCGGCCTCTCCATCGCCGGCGGGATTCGTAAGAAGGGCACCGGTGTCAGAGCCTGGCTCCTACTCGACGCTACTGGACAGACACAAGTGGTCGAAGCTGGCAAGCATGCTATTATGCGCAGGACGGGCTTGCCCGCCCGGGACCTCCGGATCCTCGATCCCCTCCTGTCCTACCCTTCCACGGTTCTGGGGCGTGAGAGAGCCATCGTGATCAATTTGGAGCACATCAAAGCGATAATCACTGCACAAGAAGTTCTCTTGCTGAATTCGAGGGACCCCTCTGTGACCCCTTTTGTTGAGGAGCTTCAGAGACGGATTCTTCATCACCACCAAGCCACTAAAGCTCAGGAGGGAAACGGCGATGATTCAAACTGGACAAATTTGTACGATTTGGAAGAGCCACAATCTAGGACTGTTAGTCCTCGAAATTCTACCATGGGTTTTAGGCAGATCCAGGATCAAGATGGGGAAAGTAAAGCTGAAGGAAAACAAGATTTCCAGAATAGAGATGGAATGAAGATTCTTCCATTTGAGTTTGTAGCATTGGAGGCATGCCTTGAGGCTGCTTGTAGTGTCTTAGAAAATGAGGCAAAAACATTGGAGCAGGAGGCTCATCCTGCCTTAGATAAGTTGACTTCAAAGATTAGTACTCTCAATTTGGAACGCGTTCGTCAAATTAAAAGCCGTTTAGTTGCAATTACTGGTCGTGTTCAAAAGGTAAGGGATGAATTAGAGCACTTGCTGGATGATGATGAAGATATGGCTGAGATGTATCTGACAGAAAAGTTAGTTCAACAACAGCTTGAAAATTCTTCTGCCTCATCCATGAATGATGGGGATGAGATGGATAACCAAGTTCTTCGACCTGATATAGATGACAGGATGCCTCCTGAAATATCATTGGAAGCTGGTGGAGGTGCTGCTAGTTATGAAGATCATCAAAATGCTGACAACTCAAGAGACCAAATGTTTGGTGTTCCAAATGCACTTGGAAGGGACAGCCATGGAACCCGTACTAGCACCACCTACAGTGCTGTAACCAAGAACCTTGATGTGGAGGAGCTTGAGATGCTCTTGGAAGCATACTTTGTGCAAATCGATGGCACACTGAACAAACTATCTACGCTGAGGGAGTACGTTGACGACACTGAGGACTACATCAACATCATGCTGGATGACAAACAGAACCATCTGTTGCAAATGGGAGTCATGTTGACGACGGCAACCCTGGTAGTGAGCGCCTTCGTGGTCGTGGCCGGTATATTTGGAATGAATATTAAGATTGAGCTATTTAATGATCAAATAGCCGGGATGCGAGAGTTCCTCTGGACTGTTGGCGGCAGCACTGCCGGGAGCATATTCTTGTATGTGGTTGCTATTGCCTGGTGTAAACATAAAGGCCTGCTAGAGTTGTAG 2577 0.454 MLAAAVNIHHKHEMRNMAPPTLPPYQLFWCFILLLLLLPLSNSVASQTIVKSLPGFSGELPFLLETGYIGVGELDEVQLFYYFFESEQNPKDDPLVLWLPSGPGCSALSAIMYEIGPLSFNYKSSSGDKPVLALNEYSWTKWLLAHSQFQTNQVYIAGDSYSGITVPTLVKKILDGQEAGNFPEINLEGYVLGNPFTDVYYDVNSRIKFAHRLALLSDELYEDYDYVFVNIWANDIAVQEALNVRNGTITQWERCNKSLSYEFDIESSVKYHKNFTNTDLRALVYSGDHDLIIPHVGTEEWIESLNLTVSADYDEWRPWYFDGQVAGSQSSRIQARGKLFHDCFRKKLIWDRHRNLFPMRGHQPDTSKSGLPANEDDPDVTRPTSAAIGLSIAGGIRKKGTGVRAWLLLDATGQTQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKAIITAQEVLLLNSRDPSVTPFVEELQRRILHHHQATKAQEGNGDDSNWTNLYDLEEPQSRTVSPRNSTMGFRQIQDQDGESKAEGKQDFQNRDGMKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKLVQQQLENSSASSMNDGDEMDNQVLRPDIDDRMPPEISLEAGGGAASYEDHQNADNSRDQMFGVPNALGRDSHGTRTSTTYSAVTKNLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIKIELFNDQIAGMREFLWTVGGSTAGSIFLYVVAIAWCKHKGLLEL 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1798 858 Gene3D Magnesium transport protein CorA, transmembrane region 537 785 - -
Glsi03g1798 858 FunFam Magnesium transporter MRS2-1 394 477 - -
Glsi03g1798 858 MobiDBLite consensus disorder prediction 654 701 - -
Glsi03g1798 858 Pfam Serine carboxypeptidase 54 142 IPR001563 GO:0004185|GO:0006508
Glsi03g1798 858 Pfam Serine carboxypeptidase 223 329 IPR001563 GO:0004185|GO:0006508
Glsi03g1798 858 SUPERFAMILY alpha/beta-Hydrolases 50 329 IPR029058 -
Glsi03g1798 858 MobiDBLite consensus disorder prediction 670 684 - -
Glsi03g1798 858 Gene3D alpha/beta hydrolase 225 338 IPR029058 -
Glsi03g1798 858 Gene3D alpha/beta hydrolase 142 224 IPR029058 -
Glsi03g1798 858 Gene3D - 395 477 - -
Glsi03g1798 858 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 384 856 IPR039204 -
Glsi03g1798 858 MobiDBLite consensus disorder prediction 521 554 - -
Glsi03g1798 858 MobiDBLite consensus disorder prediction 521 539 - -
Glsi03g1798 858 Coils Coil 570 590 - -
Glsi03g1798 858 MobiDBLite consensus disorder prediction 654 668 - -
Glsi03g1798 858 Gene3D alpha/beta hydrolase 43 141 IPR029058 -
Glsi03g1798 858 MobiDBLite consensus disorder prediction 360 380 - -
Glsi03g1798 858 CDD Mrs2_Mfm1p-like 406 855 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1798 Glsi-ChrGlsi03 79933161 79944013 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1798 359 857 MRS2 Gene Family AT3G19640 66.068 0.0 598