Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1781 ATGGAAGCAAGGAAGGAACCATTACCCTTTAACTACAAGGGGGAGAGGCTCTTTGGGAATATCACCAGCAATTTCAATCTTGCAGGTTTGGTTACTTGTCCAGATGGCAGAGGGTTTGCGTGGGTAGGTGGGCCCATGGCTAAAGGAAGAAGCAACACATCACGAATTGTTATTGCCATAGTTGTGCCCATTGCTTTGATTGCCGCCCTGCTCATCCTTATCTGCATCTATTTAAGAAAGAGGAAGCCACGGAAATATATTAAAAATCCAATCAAACGGGCACAGTTGTCTTGGGAAAGGCGACAAAAGATCATAGGAGGCATTGCTAGAGGACTTCTTTACCTTCATGAGGATTCTCGCTTGCGGATTATTCATCGTGATCTCAAAACAAGTAATATTCTTTTAGATGCAGAGATGAATTCAAAGATATCAGATTTTGGCATGGCAAGACTTTTTGAAATCGACCAAACTCAAGGCAATACAAATAGAATAGTTGGAACCTAG 504 0.4206 MEARKEPLPFNYKGERLFGNITSNFNLAGLVTCPDGRGFAWVGGPMAKGRSNTSRIVIAIVVPIALIAALLILICIYLRKRKPRKYIKNPIKRAQLSWERRQKIIGGIARGLLYLHEDSRLRIIHRDLKTSNILLDAEMNSKISDFGMARLFEIDQTQGNTNRIVGT 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1781 167 Gene3D Transferase(Phosphotransferase) domain 1 62 167 - -
Glsi03g1781 167 SUPERFAMILY Protein kinase-like (PK-like) 86 167 IPR011009 -
Glsi03g1781 167 ProSiteProfiles Protein kinase domain profile. 1 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1781 167 Pfam Protein kinase domain 72 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1781 167 FunFam Os07g0541700 protein 80 167 - -
Glsi03g1781 167 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 96 167 - -
Glsi03g1781 167 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1781 Glsi-ChrGlsi03 79660947 79664949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1781 72 167 Receptor kinase-like Gene Family AT4G23190 63.542 2.99e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi03g1781 Pkinase 7.1e-16 CL0016