Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1780 ATGCTTCTCTTCAAAAACTCTCTTTTGCTTCTTTCCCTTTCTGGGTTTCTTCTCATAAGCCTATTGGCATCCGAAGCAGCTCCAATTTACAATGGTCATTACTGCCCCACAAATGACACTACTTTCAAAGCCAACAGTACATTTCAACGCAATCTCAATGTCCTCCTCTCTTCTCTCGCCTCCAACGGCTCCCAAAACGACGCTGGTTTCTATAGCACCGTCATGGCCTTCGGAACCACCGACGCCGTCAACGGACTCTTCCTCTGCCGTGGTGACATAAACACAGCCACGTGTCGCGATTGCGTCACTGCCGCAGCCAAACAGATAGCAGTCCAATGCCCCAACCAAACACAGGCCATAATCTGGTATGACGTGTGCACGCTGCGTTACACAAACACTTACTTCAGGTTCGGAAGCGTCGTTCCCAGAATGACCTTGGAAGACGAGAAGAACGTTTCTGGCGCCGACATGAATCGGTTCAATCAGTCGTTGTTAAGCTTGTTGAATGATTTGGGTACGGACGCTGGGAATTCGCAGACGGAGAAGAAGTTCGCGACGAGGGAAGTGAAGTTCACCCGCGAGCTGACCCTGTACGGGCTAGCGCAGTGCACGCCGGACTTAACGACGGAGCAATGTGAGACGTGTTTGAAAAACGCTGCTGGAATGATTCCGACGTGTTGTGAGGGAAAACAAGGAGCTAGAGTTCTACTTGCGTCCTGTAATGTTAGATACGATTTGAACCCATTTTACAATATAACCTCGTCGTCACCTTCTACTGCTTCTTCTGGAAAGAAGAAAATTGGATCAGGAATAATTGCCATGATTGTTGTCCTTGTCGTTGTTTTTATAATTGTCGTGTGTTTTGGCTGCTATTTCCTGCTGAGAAAATCAAGGAAGAATTATAGGACTATTCTAAGAGAAAATTTTGGGAAGGAAAGTGACACTTTGGAGTCCTTGCAATTCCATTTGGCTGCAGTTGAAGCAGCAACAAACAAGTTTTCGCACCAGAACAAAATAGGCGAAGGTGGATTTGGAGAAGTTTACAAGGTGACACTCAAAGTTATACATCGTGATCTTAAACCTAGCAATGTATTGCTAGATGACAATATGAATCCAAAAATATCAGATTTTGGATTGGCCAGGATGGTTTCTTTAGATCAAGACCGAGGAAGAACAAAAAGAATAGTTGGAACATAG 1197 0.4528 MLLFKNSLLLLSLSGFLLISLLASEAAPIYNGHYCPTNDTTFKANSTFQRNLNVLLSSLASNGSQNDAGFYSTVMAFGTTDAVNGLFLCRGDINTATCRDCVTAAAKQIAVQCPNQTQAIIWYDVCTLRYTNTYFRFGSVVPRMTLEDEKNVSGADMNRFNQSLLSLLNDLGTDAGNSQTEKKFATREVKFTRELTLYGLAQCTPDLTTEQCETCLKNAAGMIPTCCEGKQGARVLLASCNVRYDLNPFYNITSSSPSTASSGKKKIGSGIIAMIVVLVVVFIIVVCFGCYFLLRKSRKNYRTILRENFGKESDTLESLQFHLAAVEAATNKFSHQNKIGEGGFGEVYKVTLKVIHRDLKPSNVLLDDNMNPKISDFGLARMVSLDQDRGRTKRIVGT 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1780 398 ProSiteProfiles Protein kinase domain profile. 149 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1780 398 Gene3D Phosphorylase Kinase; domain 1 296 355 - -
Glsi03g1780 398 ProSiteProfiles Gnk2-homologous domain profile. 140 249 IPR002902 -
Glsi03g1780 398 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 135 - -
Glsi03g1780 398 Pfam Salt stress response/antifungal 35 132 IPR002902 -
Glsi03g1780 398 Pfam Salt stress response/antifungal 156 245 IPR002902 -
Glsi03g1780 398 SUPERFAMILY Protein kinase-like (PK-like) 321 398 IPR011009 -
Glsi03g1780 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 354 366 IPR008271 GO:0004672|GO:0006468
Glsi03g1780 398 Gene3D - 30 135 IPR038408 -
Glsi03g1780 398 Gene3D - 144 249 IPR038408 -
Glsi03g1780 398 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 14 256 - -
Glsi03g1780 398 Pfam Protein kinase domain 353 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1780 398 FunFam Cysteine-rich receptor-like protein kinase 10 142 249 - -
Glsi03g1780 398 Gene3D Transferase(Phosphotransferase) domain 1 356 398 - -
Glsi03g1780 398 ProSiteProfiles Gnk2-homologous domain profile. 30 135 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1780 Glsi-ChrGlsi03 79623531 79625463 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1780 352 398 Receptor kinase-like Gene Family AT4G05200 65.957 9.37e-14 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi03g1780 Stress-antifung 8.5e-17 No_clan