Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1776 ATGCTTATCTGCAAATGCTCTGTAACGCCACTTTTTCTTCTTTCTCTATTTTTGTTGCTTAGCCCTACAAGTGAAGCAGCTCCCATTTACAGCGCTTATTCTTGTACAAACGATGCCCTTTTCCTACCCAACAACACATTCCAATCCAATATGAATATGCTTCTATCTTCTTTTACCTCCAAAGCCTCCGTCCCCAATGGCTTTTACAGGACAATTGTAGCTAAGGACACTCCCGACGCTGTCGCTGGATATTTTCTCTGCCGAGGCAACGTCAACGCCACCGTCTGTCAAGGGTGCGTCACTGCTGAAGCGAAAGAGATAATATGCCGCTGCCCAAACCAAACAGAGTCAATAATTTGGTACGATGTGTGTATGTTGCATTACTTGGACATTTCCTTCAACCACCTAGTCCCTTCATTCAGCTTTGAGAATGACAAGAACTTCATTGCCTCAAACCTTGATTTGTTCATGGAAGAACGCCATAGCTTCCCTTCCGCGCCGTGTTGTGGCGGAAGCCTAAGTGCAACGGTTCTGCTTCCAGCATGTACTCTTAGATATGAAATGTACCCATTTTACAGTGTAATCCCAACATCAGCTGAACCACTTGTTCCTCCTCCTTCTTTAGGAAAATGCAATGCCTCAATAGTTGTGGCCATATTGTTGTCTCAATTGCTGACAGCACCAGACAATTTCAAACATGAGCTTGATTCTGATCAGTTTACCAGACCTACAATCCCATTGTCCTTGAATGAGGCATCAATTACTGATTATACCTTTGATAAACTTAGAACTCGCCCAAGTCCAGACTCCACTCCAAGCTCCAATCTTGCAAGTTCATCTCACCCACGAGTTCTTCCTTCAGCAGATGGCCCTACTTTCCTTCGCGAGAACTGCACGAGCGATGAAAGCTTCAGTGCAAACAGCGTCTTCCAATCAAACCTCAGTACCCTCCTCTCTTCCTTAACTTCCAACGCCACCGGCAACTCCGGATTCTACAACACCACCGTCGCCGCCGGAAACCACTCCGATGCAGTCTATGGCCTCTTTATGTGCCGAGGTGACGTCCCCGTTGATCTCTGTCGAGAATGCGTTTTGAACGCAACCCAAAGACTTGGTAGTCAAGGCTCAGACACTTGTCCCTTTTCTAAAGGAGCTATAATATGGTATGATGAGTGCATGGTTCGCTATTCCAACCGGAATTTCTTCTCCACCATGGACACAAGACCTAGAATGCGTCTGAGGAACACCGGGAATGTCACCGACTCAATGAAACAAAGGTTCATGCGTTTACTGTACATCACGTTGAACGAAACGGCAGATGAGGCCGCGAAATTTCCTAGAGGAGTTAAGAAATATGCGACAAAGCAAGCGAACCTGTCTGCTTTTCAGACACTATACACTCTAGCACAGTGCACGCCGGACCTGTCGCCCCAAGATTGCCGGAGGTGTTTGAGTATTGTGATTGGGGATGTTCCATGGTGTTGTACATACAGGATTGGAGGAAGAGTTCTGTATCCCAGCTGCAACTTCAGGTATGAATTATACCCCTTCTATAGAGTGGCTTCCCTCGGACCAACCCCTACACCAGCAGGTCTTGGTCCTCCTACAGCTTCTGCAAAACACAAAGGAAAAAGTGGGATCTCATCGGGGACAATTGTTGCCATTGTGGTTCCAATTACAGTTGCTGTGCTGCTGTTCATCGTGGGCGTTTGTTTCTTAAGTAAAAGAGCAAGGAAGAAGCATGAGTCTGTCCAGGAAGGAAAAAGTACAAATGATATCACCACTCTGGAGTCATTGCAATTTGATTTCAGTACAATTGAAGCTGCCACAAACAAGTTCTCTGAAGATAACAAGCTGGGTGAAGGTGGATTTGGAGAGGTTTTCAAGGGAACTCTTCCAAGTGGACAAGAAATAGCTGTGAAGAGACTCTCCCAAAGCTCTGGACAAGGTGTAGAACAATTTAAGAATGAGGTAGTGGTGGTTGCCAAGCTTCAACACAGAAATTTAGCAAGGCTTCTGGGATTTTGTTTGGAAGGAGAAGAAAAGATACTTGTTTATGAATTTGTGCCCAACAAAAGTCTTGACTACATTCTTTTTGACCCTAACAAGCAAAGAGAGTTGGATTGGACAAGACGTTACAAGATTATCGGAGGAATTGCTCGAGGCATTCAATATCTTCATGAAGATTCTAGGCTTAGAATCATACATCGTGATCTTAAAGCTAGCAATATATTGTTGGATGGTGATATGAATCCGAAAATCTCAGATTTTGGCATGGCAAGAATTTTTGTTATTGATCAAACTCAAGGAAACACTAGTTGGATTGTTGGGACATATGGTTATATGCCTCCTGAATATGCTATGCACGGCGAGTTTTCTGTTAAGTCTGATATTTACAGCTTTGGAGTCCTCCTTATAGAGATAATAAGTGGCAAAAAGAATAGCTCTTTCTATCACACAGATGGTGCTGAGGATCTTCTGAGCTATGCTTGGAAACTATGGAAGGATGGTGCACCCTTGGAAATGGTGGACCCCACATTAAGAGGATCGTATACTCAAAATGAAGTCATCAGATGCATCCACATTGGTTTACTCTGTGTCCAAGAAGATCCAGCAGATAGACCAACAATGGCATCAATATTACTCATGCTTGATAGTTACTCTGTTACTCTGGCAACACCTAAGCAGCCTGCATTTTTTTTCCACAGTGGAACTGATACAAACATGCCAAAGCAGTTCGGATTTGGTCAATCTATAGACAATTTAATACCAATGTCTGTCAATGAGATGTCAGTTAGTGAAGTAATTCCACGATAA 2817 0.4388 MLICKCSVTPLFLLSLFLLLSPTSEAAPIYSAYSCTNDALFLPNNTFQSNMNMLLSSFTSKASVPNGFYRTIVAKDTPDAVAGYFLCRGNVNATVCQGCVTAEAKEIICRCPNQTESIIWYDVCMLHYLDISFNHLVPSFSFENDKNFIASNLDLFMEERHSFPSAPCCGGSLSATVLLPACTLRYEMYPFYSVIPTSAEPLVPPPSLGKCNASIVVAILLSQLLTAPDNFKHELDSDQFTRPTIPLSLNEASITDYTFDKLRTRPSPDSTPSSNLASSSHPRVLPSADGPTFLRENCTSDESFSANSVFQSNLSTLLSSLTSNATGNSGFYNTTVAAGNHSDAVYGLFMCRGDVPVDLCRECVLNATQRLGSQGSDTCPFSKGAIIWYDECMVRYSNRNFFSTMDTRPRMRLRNTGNVTDSMKQRFMRLLYITLNETADEAAKFPRGVKKYATKQANLSAFQTLYTLAQCTPDLSPQDCRRCLSIVIGDVPWCCTYRIGGRVLYPSCNFRYELYPFYRVASLGPTPTPAGLGPPTASAKHKGKSGISSGTIVAIVVPITVAVLLFIVGVCFLSKRARKKHESVQEGKSTNDITTLESLQFDFSTIEAATNKFSEDNKLGEGGFGEVFKGTLPSGQEIAVKRLSQSSGQGVEQFKNEVVVVAKLQHRNLARLLGFCLEGEEKILVYEFVPNKSLDYILFDPNKQRELDWTRRYKIIGGIARGIQYLHEDSRLRIIHRDLKASNILLDGDMNPKISDFGMARIFVIDQTQGNTSWIVGTYGYMPPEYAMHGEFSVKSDIYSFGVLLIEIISGKKNSSFYHTDGAEDLLSYAWKLWKDGAPLEMVDPTLRGSYTQNEVIRCIHIGLLCVQEDPADRPTMASILLMLDSYSVTLATPKQPAFFFHSGTDTNMPKQFGFGQSIDNLIPMSVNEMSVSEVIPR 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1776 938 Pfam Protein tyrosine and serine/threonine kinase 616 881 IPR001245 GO:0004672|GO:0006468
Glsi03g1776 938 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Glsi03g1776 938 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 574 688 - -
Glsi03g1776 938 FunFam Cysteine-rich receptor-like protein kinase 25 409 517 - -
Glsi03g1776 938 ProSiteProfiles Gnk2-homologous domain profile. 292 401 IPR002902 -
Glsi03g1776 938 MobiDBLite consensus disorder prediction 261 285 - -
Glsi03g1776 938 SMART serkin_6 613 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1776 938 FunFam cysteine-rich receptor-like protein kinase 10 689 891 - -
Glsi03g1776 938 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 276 932 - -
Glsi03g1776 938 ProSiteProfiles Protein kinase domain profile. 613 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1776 938 CDD STKc_IRAK 619 885 - -
Glsi03g1776 938 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 133 - -
Glsi03g1776 938 ProSiteProfiles Gnk2-homologous domain profile. 407 517 IPR002902 -
Glsi03g1776 938 Gene3D Transferase(Phosphotransferase) domain 1 689 896 - -
Glsi03g1776 938 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 291 400 - -
Glsi03g1776 938 Gene3D Phosphorylase Kinase; domain 1 573 688 - -
Glsi03g1776 938 Pfam Salt stress response/antifungal 298 398 IPR002902 -
Glsi03g1776 938 Pfam Salt stress response/antifungal 424 515 IPR002902 -
Glsi03g1776 938 Pfam Salt stress response/antifungal 41 128 IPR002902 -
Glsi03g1776 938 ProSitePatterns Protein kinases ATP-binding region signature. 619 641 IPR017441 GO:0005524
Glsi03g1776 938 ProSitePatterns Serine/Threonine protein kinases active-site signature. 734 746 IPR008271 GO:0004672|GO:0006468
Glsi03g1776 938 SUPERFAMILY Protein kinase-like (PK-like) 598 905 IPR011009 -
Glsi03g1776 938 MobiDBLite consensus disorder prediction 264 282 - -
Glsi03g1776 938 Gene3D - 409 517 IPR038408 -
Glsi03g1776 938 Gene3D - 29 133 IPR038408 -
Glsi03g1776 938 Gene3D - 291 401 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1776 Glsi-ChrGlsi03 79592699 79601624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1776 291 938 Receptor kinase-like Gene Family AT4G05200 55.030 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi03g1776 PK_Tyr_Ser-Thr 5.7e-46 CL0016