Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1757 ATGCTATCTAATGTAACGTATTCTGCAGTACCCGTCCTTCTCTTGCATTACAGCAGTTGTGGGGTTAATATTCTGATAGGCAAAGATTGTCACATGCTATCTAATGTAACATATTATCTAGTACCCGTCCTTCTCTTGCATTACAGCAGTTGTGGGGTTGATATTCTGATAGGCAAAGTACCAAGCGCGTCAATTGTTCCATCTCACTTTCCCCTTTGCTCTTCACTGGTACTTGAGTTCTTATCTCAAATGGCTGCCTCAGAACATTCTTCCACGGATGAAGCCTTGGAGAACTTTCCAGAGGAGATCAGAGAAGAATCAAAGCTAGAATTCTCCAACGAAGAGGAAGAATTGATTATCAGAATGTATAATCTAGTTGGTGAAAGGTGGGGTTTGATAGCTGGGAGGATCCCTGGAAGAACAGCTGAAGAGATCGAAAAGTACTGGACCTCTAGATATTCAACAAAAGATGCACTTCATGTGACCATAATCTCCAAAACATTCCCTATTAACGTTTATTCTCCTGCCGAGACGATGGGAGACTACAATAGACGAAAAGCTAGGAAACTCCAGAACTTGTCACTGTCTCAATCACTAAAGCAGAGGATAATATTACCTGTTCCACTTAGCCAAGAGACAGTTATGTTTATAAATTAA 657 0.4079 MLSNVTYSAVPVLLLHYSSCGVNILIGKDCHMLSNVTYYLVPVLLLHYSSCGVDILIGKVPSASIVPSHFPLCSSLVLEFLSQMAASEHSSTDEALENFPEEIREESKLEFSNEEEELIIRMYNLVGERWGLIAGRIPGRTAEEIEKYWTSRYSTKDALHVTIISKTFPINVYSPAETMGDYNRRKARKLQNLSLSQSLKQRIILPVPLSQETVMFIN 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1757 218 SMART sant 107 155 IPR001005 -
Glsi03g1757 218 FunFam MYB-like transcription factor 110 152 - -
Glsi03g1757 218 Pfam Myb-like DNA-binding domain 110 150 IPR001005 -
Glsi03g1757 218 Gene3D - 110 166 - -
Glsi03g1757 218 CDD SANT 110 149 IPR001005 -
Glsi03g1757 218 SUPERFAMILY Homeodomain-like 110 153 IPR009057 -
Glsi03g1757 218 ProSiteProfiles Myb-like domain profile. 103 153 IPR001005 -
Glsi03g1757 218 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 110 175 - -
Glsi03g1757 218 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 157 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1757 Glsi-ChrGlsi03 79459973 79467281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1757 111 178 MYB Transcription Factor Family AT5G14750 38.356 3.27e-13 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi03g1757 Myb_DNA-binding 3.3e-08 CL0123