Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1746 ATGTTCCAGCCAAACATGTTCGATTCTCACCACCATTTGCTCGATATGTCCCACAAGACTTCGTCCGACAGTGATCTAGGAAGAACCAAAGATGATGATTACGAGAGCAAATCAGGCACTGAGACCATGGAAGCTCCTTCAGGGGACGACCAAGATCCCAACCAACGTCCAAAGAAGAAGCGCTACCACCGCCACACACAGCGCCAAATTCAAGAGATGGAAGCCTTCTTCAACGAGTGTCCTCACCCAGATGACAAGCAAAGGAAAGAGCTGAGCCGTGAGCTGGGGTTAGAGCCTTTGCAAGTCAAGTTTTGGTTCCAAAACAAGCGTACCCAAATGAAGTCTCAACATGAACGCCACGAGAATGCTATTTTGAAGGCTGAAAATGAAAAACTTCGTGCTGAGAACAATAGGTACAAGGAAGCCCTAAGTAATGCCACATGCCCTAACTGTGGAGGCCCTGCTGCTCTTGGTGAAATGTCCTTCGACGAGCAGCACCTGAGGATTGAGAATGCTCGACTAAGAGAAGAGATAGATAGGATATCAGGAATTGCAGCCAAATATGTCGGAAAACCTGTGACTTCCTACTCTCACCTTTCGTCTCACGTGCCTTCGCGATCTCTTGATGACCTCGGGGTTGGTAACTATGGAGCACAATCAGGCATGGTAGGGGAGATGTATTCTGGTAGTGATCTTCTTAGATCACTCCCAGTACCTGCCGAAGCTGATAAACCCATGATCGTGGAGCTTGCTGTTGCAGCAATGGAGGAACTTACAAGATTGGTACAGGCTGGAGACCCCTTGTGGGTCTCTAGTGACCACTCTACTGAGATCCTGAATGAAGATGAATACTTGAGGACTTTCCCTAGAGGAATAGGTCCAAAACCCTTGGGTTTAAAATCTGAAACTTCAAGGGAATCCGCTGTGGTTATCATGAATCATATTAACCTTGTTGAGATTCTTATGGACGTTAATCAATGGTCAACTGTGTTTTGCGGCATTGTTTCAAGAGCAATAACCCTTGAAGTCCTATCAACTGGAGTAGCAGGAAATTATAACGGAGCTTTGCAAGTGATGTCGGCTGAGTTCCAGGTCCCTTCACCCCTTGTTCCTACTCGAGAGAACTATTTTGTAAGGTACTGTAAGCAGCATTCAGATGGGACATGGGCAGTGGTCGATGTTTCTTTGGACAACCTACGACCTGGTGCATTATCAAGAAGCCGAAGGAGGCCATCTGGTTGTATAATTCAAGAACTGCCAAATGGGTATTCAAAGGTTACCTGGATTGAACATGTAGAAGTGGATGATAGAGCTGTACACAATATATATAGACCTCTTGTCAATTCTGGCCTTGCCTTTGGAGCTAAACGTTGGGTGGCTACATTAGATAGACAATGTGAACGTCTTGCTAGTTCCATGGCCAGCAACATACCAGCTGGAGACCTTTGTGTGATAACCAGTGCTGAGGGAAGGAAGAGTATGCTGAAGCTGGCAGAGAGGATGGTGATGAGCTTTTGCACTGGTGTTGGGGCTTCTACAGCACATGCTTGGACAACCCTTTCTGCTACAGGTTGTGATGATGTGAGGGTCATGACCAGAAAGAGTATGGATGATCCAGGCAGGCCTCCTGGTATAGTGCTCAGTGCTGCAACTTCCTTCTGGCTTCCAGTTCCTCCTAAGAGGGTTTTCAGTTTCCTTCGAGATGAAAACTCAAGAAGTGAGTGGGATATTCTATCCAATGGGGGTCTGGTCCAAGAAATGGCACACATAGCAAATGGTCGCGATCCAGGAAACTGTGTCTCTTTACTTCGTGTCAATAGTGCCAATTCAAGCCAAAGCAATATGCTGATACTTCAGGAGAGTTGCACTGACTCTACAGGTTCATATGTAATCTATGCTCCAGTTGATATTGTTGCCATGAATGTAGTCTTGGGTGGTGGGGACCCAGACTATGTTGCCCTCTTGCCCTCAGGTTTTGCAATTCTTCCTGATGGGTCTGGACTAAATGGAGGGCCAATTCTTGACGTTGGATCTGGAGTTGGAACAAAAGATAGAGAAAGAAGAGAAGCTGGGAAAGGAGGGAACAAGTCAATGAACGCACCTTGA 2106 0.4649 MFQPNMFDSHHHLLDMSHKTSSDSDLGRTKDDDYESKSGTETMEAPSGDDQDPNQRPKKKRYHRHTQRQIQEMEAFFNECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKSQHERHENAILKAENEKLRAENNRYKEALSNATCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPVTSYSHLSSHVPSRSLDDLGVGNYGAQSGMVGEMYSGSDLLRSLPVPAEADKPMIVELAVAAMEELTRLVQAGDPLWVSSDHSTEILNEDEYLRTFPRGIGPKPLGLKSETSRESAVVIMNHINLVEILMDVNQWSTVFCGIVSRAITLEVLSTGVAGNYNGALQVMSAEFQVPSPLVPTRENYFVRYCKQHSDGTWAVVDVSLDNLRPGALSRSRRRPSGCIIQELPNGYSKVTWIEHVEVDDRAVHNIYRPLVNSGLAFGAKRWVATLDRQCERLASSMASNIPAGDLCVITSAEGRKSMLKLAERMVMSFCTGVGASTAHAWTTLSATGCDDVRVMTRKSMDDPGRPPGIVLSAATSFWLPVPPKRVFSFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLILQESCTDSTGSYVIYAPVDIVAMNVVLGGGDPDYVALLPSGFAILPDGSGLNGGPILDVGSGVGTKDRERREAGKGGNKSMNAP 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1746 701 SUPERFAMILY Homeodomain-like 43 116 IPR009057 -
Glsi03g1746 701 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 55 676 IPR042160 -
Glsi03g1746 701 FunFam Homeobox-leucine zipper protein HDG1 47 132 - -
Glsi03g1746 701 ProSitePatterns 'Homeobox' domain signature. 91 114 IPR017970 GO:0000981|GO:0006355
Glsi03g1746 701 Gene3D - 46 132 - -
Glsi03g1746 701 FunFam Homeobox-leucine zipper protein GLABRA 2 249 467 - -
Glsi03g1746 701 SUPERFAMILY Bet v1-like 489 667 - -
Glsi03g1746 701 SMART HOX_1 57 120 IPR001356 GO:0003677
Glsi03g1746 701 ProSiteProfiles START domain profile. 240 471 IPR002913 GO:0008289
Glsi03g1746 701 MobiDBLite consensus disorder prediction 676 701 - -
Glsi03g1746 701 CDD homeodomain 59 117 IPR001356 GO:0003677
Glsi03g1746 701 SUPERFAMILY Bet v1-like 241 470 - -
Glsi03g1746 701 MobiDBLite consensus disorder prediction 17 67 - -
Glsi03g1746 701 CDD START_ArGLABRA2_like 244 467 - -
Glsi03g1746 701 Pfam START domain 250 468 IPR002913 GO:0008289
Glsi03g1746 701 ProSiteProfiles 'Homeobox' domain profile. 56 116 IPR001356 GO:0003677
Glsi03g1746 701 MobiDBLite consensus disorder prediction 17 39 - -
Glsi03g1746 701 Coils Coil 110 145 - -
Glsi03g1746 701 SMART START_1 249 468 IPR002913 GO:0008289
Glsi03g1746 701 Gene3D - 317 472 IPR023393 -
Glsi03g1746 701 Pfam Homeodomain 59 114 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1746 Glsi-ChrGlsi03 79407813 79412249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1746 1 664 Homeobox Transcription Factor Family AT4G21750 82.622 0.0 1168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Glsi03g1746 START 1.6e-57 CL0209