Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1702 ATGGTTCGTCCCTGTATAAAAAGGGTCAGCAAAGCAAGGAAGCCTTTGAGGTTCATTGAACCTAGACGCAATTTCGGGACTGAGGTTGATGATTACGTGGCAGAATATGATTGGATAGAAGGAAACCCGTGGCTCATGGCTTCCGTCAGAGCAATCACATCCTCTATGGATATGGCTGAGGCTACACCAGCTGCTGCTCCTAATGCAGAGTTGTTGGAATGGCCAAAGAAAGATAGGCGTCGCTTCCTTCATGCTGTGTACCGTGTTGGTGATCTTGATCGCACCATCAAGTTTTACACAGAATGTTTTGGAATGAAGCTTTTGAGGAAAAGAGATGTACCTGAGGAGAAATATGCAAATGCTTTTCTCGCATTTGGCCCCGAACAATCCCATTTTGTGTTGGAATTAACATATAATTATGGGGTGACTTCCTATGATATAGGAACTGGGTTTGGACATTTTGCAATTGCAACTCCAGATATCTACAAATTGGTTGAAACCATCCGAGCCAAGGGTGGAACCATCACCAAGGATCCTGGTGTGGGTAAGGGTGGGACGTCTGTGCTTGCGTATGTGAAGGATCCTGATGGTTACTCATTTGAGCTCATCCAAAGAGATTCAAATCCTGACCCACTCTGTCAACTGATGCTTTTTGTTGCTGATTTAGAGCGCTCAATTAAGTTCTATGAAAAGGCGTTGGGAATGAAGGTCGTGAATAAGATTGATAGCCCTGAACACAAGTTTAGCATAGCTCTGCTAGGGTATGGAGAGGAGCATGAGACAATTGTTTTGGAGTTGGTATACAAATATGGCGTCACTGAATACACTAAGGGGAATGCATATGCACAGGTTGCTATTGGTACTGATGACGTATACAAGAGTGCTGAGGTAGTGAACTTAGTGACGCAAGAGCTTGGAGGGAAGATTACAAGGCAGCCAGGACCAGTTCCTGGCCTTAACACAAAAATCACTTCATTCTTAGATCCAGACGGATGGAAAACTGTGTTGGTTGACAATGAAGACTTCCTGAAGGAACTGAAGTGA 1044 0.4425 MVRPCIKRVSKARKPLRFIEPRRNFGTEVDDYVAEYDWIEGNPWLMASVRAITSSMDMAEATPAAAPNAELLEWPKKDRRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYANAFLAFGPEQSHFVLELTYNYGVTSYDIGTGFGHFAIATPDIYKLVETIRAKGGTITKDPGVGKGGTSVLAYVKDPDGYSFELIQRDSNPDPLCQLMLFVADLERSIKFYEKALGMKVVNKIDSPEHKFSIALLGYGEEHETIVLELVYKYGVTEYTKGNAYAQVAIGTDDVYKSAEVVNLVTQELGGKITRQPGPVPGLNTKITSFLDPDGWKTVLVDNEDFLKELK 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1702 347 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 81 205 IPR037523 -
Glsi03g1702 347 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 215 333 IPR004360 -
Glsi03g1702 347 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 83 202 IPR004360 -
Glsi03g1702 347 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 212 338 IPR029068 -
Glsi03g1702 347 Gene3D - 208 347 IPR029068 -
Glsi03g1702 347 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 211 339 IPR037523 -
Glsi03g1702 347 NCBIfam lactoylglutathione lyase 82 207 IPR004361 GO:0004462|GO:0046872
Glsi03g1702 347 ProSitePatterns Glyoxalase I signature 2. 148 160 IPR018146 GO:0004462|GO:0046872
Glsi03g1702 347 CDD GlxI_Ni 83 203 - -
Glsi03g1702 347 Gene3D - 53 207 IPR029068 -
Glsi03g1702 347 PANTHER LACTOYLGLUTATHIONE LYASE 63 346 - -
Glsi03g1702 347 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 80 207 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1702 Glsi-ChrGlsi03 79075323 79082970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1702 214 338 Calmodulin-binding Proteins AT1G08110 26.000 9.50e-09 53.5