Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1697 ATGAAGAGGGCTGAAGCTGTAGAGAACTCTGTTAAAGGGTGCTCTCCATCTTCTTCTTCCTCTTCTTCTTCACTTATTAGCAGTGTTGTTAATAACTCTCCTTCACAACCACCATTTGAGATGATCAGAGTTAGTCGCCGGCGTTCGGCCGGTACTCGGCTGCAGGAGATAAACCTGAAATCGCCCATTGTTAGGCCTTATGTTCGATCTAGAATGCCTCGCCTTCGCTGGACATCTGAACTTCATCGCTGTTTTGTGCATGCAGTTCAAAGGCTCGGTGGAGAAGACAGGGCTACACCAAAGTTGGTTTTACAGCTAATGAATGTGAAGGGACTCACTATCGCTCATGTTAAAAGTCACCTTCAGATGTACAGGAGCATGAAGCATGAGCATATAATTCAAGCGGAGAAGAAAAATGAGGAACATTCAACAGTCTCTTCAAGCTTTGACCCAAGCAATGGCCGACAGAATCTTCGACATGGAAACGAAGGATCCATCGACAATAGGCTTCTCGAAGAGAGCTGTATTACCCATTATATGGATGCTGGCATCCAAGCACAATGGAATCAAGGGAGAAGTGAATCGCTAAGTTGTAAGGGCGAGGAGCAGAAGACACACACCTACATCATCTTCAAGGATCTTCTTAAAACCCATTGTGCTCAAGAGACGAATGATTCTGCAGAAAAGGTGTCACTTGAGGCTGCTGGTTGTAAAAGATTCGAAGATTCAAGTAAGACGGGAGAGCGAGTAGGCGAAGAAGAGAAAGTGTCTGTGTCAATGAGCTCTAGCAATTTGCAGCCATCATCGCTCAAGCAAAAGCCTAGTCCATATGTGGATAATATCTCTCTCGAGCTCACTCTTGCTTAA 867 0.451 MKRAEAVENSVKGCSPSSSSSSSSLISSVVNNSPSQPPFEMIRVSRRRSAGTRLQEINLKSPIVRPYVRSRMPRLRWTSELHRCFVHAVQRLGGEDRATPKLVLQLMNVKGLTIAHVKSHLQMYRSMKHEHIIQAEKKNEEHSTVSSSFDPSNGRQNLRHGNEGSIDNRLLEESCITHYMDAGIQAQWNQGRSESLSCKGEEQKTHTYIIFKDLLKTHCAQETNDSAEKVSLEAAGCKRFEDSSKTGERVGEEEKVSVSMSSSNLQPSSLKQKPSPYVDNISLELTLA 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1697 288 Pfam Myb-like DNA-binding domain 75 125 IPR001005 -
Glsi03g1697 288 MobiDBLite consensus disorder prediction 145 163 - -
Glsi03g1697 288 MobiDBLite consensus disorder prediction 11 33 - -
Glsi03g1697 288 NCBIfam myb-like DNA-binding domain, SHAQKYF class 73 127 IPR006447 GO:0003677
Glsi03g1697 288 SUPERFAMILY Homeodomain-like 71 127 IPR009057 -
Glsi03g1697 288 Gene3D - 72 130 - -
Glsi03g1697 288 MobiDBLite consensus disorder prediction 137 164 - -
Glsi03g1697 288 MobiDBLite consensus disorder prediction 1 33 - -
Glsi03g1697 288 MobiDBLite consensus disorder prediction 256 275 - -
Glsi03g1697 288 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 63 287 IPR044847 GO:0000976|GO:0006355|GO:0010158
Glsi03g1697 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 129 IPR017930 -
Glsi03g1697 288 FunFam Myb family transcription factor 71 129 - -
Glsi03g1697 288 MobiDBLite consensus disorder prediction 242 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1697 Glsi-ChrGlsi03 79048802 79051651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1697 64 130 G2-like Transcription Factor Family AT2G42660 77.612 1.08e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi03g1697 Myb_DNA-binding 3.6e-07 CL0123