Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1662 ATGCCGCTTAGCAATTTTCATTTCAAAGTTCAAACCTTTAAGAGCTCCCCAAGTTCAGCTATGTCTATGGACTGGTCTAGAGGCCACACCCTTGGCCGGGGTTCTACCGCCACCGTCTCCATTGCCGAGGGTCGCAGTTCTGGTCAGGTGTTTGCTGTCAAGTCGGTGGAGCTCTACCAATCGGAATTCCTCAAGAGGGAGCAGAGGATTCTTTCCACATTGAAGTGTCCTCAGATAGTGACATACAAAGGTTGTGACGTTACATTTGAGAACGGTGTGTTCTTGTATAATTTGTTCATGGAGTATGCACCTTATGGGACAATTGCCGACGAAATTTGTAGGCAAGATGGTGGTGGGTTAGATGAGCTTGTGGTGGGTGCTCATGCACGCCAGATTCTGCTTGGGTTGACCTATCTGCATTCCAATGGGATAGTGCATTGTGACGTGAAGAGTCGAAATGTTTTGGTCACCGAAGATGGGGCTAAGATTGCTGACTTGGGTTGTGCTCGGAGGGTTTATGGCACGCCGGCGGTGGAAGATTCTGGTGGGGTGATTGCTGGCACGCCGGCGTTCATGGCACCTGAGGTGGCGCGCGGGGAGAAACAGGGGTTCCCTGCTGATGTGTGGGCTCTGGGGTGTACCGTGTTGGAGATGATCACCGGGAGAACCCCGTGGCATGACGTTTCTGACCCGGTAAGTGCTCTTTATCGGATCGGGTTCTCCAGCGAGGTACCGGAGATTCCAAGTTTAATGTCAGAGCAAGGCAAGGATTTTCTGAGCAAGTGTTTCAAAAGAAACCCGAATGAGAGGTGGTCAGTGGGTGAGCTTCTCAAACATAAGTTCGTTCGTGAATCAAGCTGTGTCTCGAAGGAATTTGATAATTCTAAATCAAATACTCCAACTAGCGTATTGGATCGAGGCTTTTGGGACTCCTTGGAAGAGTTGCAGAAAACTCAGAATCCGAATCCAACCCATCATTGTTCTTGGGATTCTCCTAGTTCTAGAACTAGAATTCGTAGGTTGTGTTCCCATATGCCAGATTGGGAATGGGATGACAAGTGGATCACTGTAAGAGACAACGTCATCACAGAGTCAGAGAGATTCTCCAATGGTGGAGAAGCTAATGAAAAAACAGAGACTTGTGGGTTAGACAATGTTGGTTACCATAGAGGGGAAGAGGACAATTGTTTGGTATATGAACCCAGAACAGTTATTAGAGTTGGATTGAGTAATTGTTCTTATGTCTACTATGTTTGTTGCAACAGAGAATCATTATCAAGCTGTTCACTATTCATAAAAATTTTTCTGAAAGGAAAATTTGATTCTCAAAAGAAGGATTTTTTTTGTTGGTGCATGATTTTCTTTCTTCCCTCTCTCTCCCTCTTTCTCTATAATTCTCCCTTTGGTGATAAGATGCAAACATTTTAA 1428 0.4573 MPLSNFHFKVQTFKSSPSSAMSMDWSRGHTLGRGSTATVSIAEGRSSGQVFAVKSVELYQSEFLKREQRILSTLKCPQIVTYKGCDVTFENGVFLYNLFMEYAPYGTIADEICRQDGGGLDELVVGAHARQILLGLTYLHSNGIVHCDVKSRNVLVTEDGAKIADLGCARRVYGTPAVEDSGGVIAGTPAFMAPEVARGEKQGFPADVWALGCTVLEMITGRTPWHDVSDPVSALYRIGFSSEVPEIPSLMSEQGKDFLSKCFKRNPNERWSVGELLKHKFVRESSCVSKEFDNSKSNTPTSVLDRGFWDSLEELQKTQNPNPTHHCSWDSPSSRTRIRRLCSHMPDWEWDDKWITVRDNVITESERFSNGGEANEKTETCGLDNVGYHRGEEDNCLVYEPRTVIRVGLSNCSYVYYVCCNRESLSSCSLFIKIFLKGKFDSQKKDFFCWCMIFFLPSLSLFLYNSPFGDKMQTF 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1662 475 ProSiteProfiles Protein kinase domain profile. 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1662 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Glsi03g1662 475 CDD STKc_MAPKKK 24 282 - -
Glsi03g1662 475 FunFam Mitogen-activated protein kinase kinase kinase 17 24 335 - -
Glsi03g1662 475 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 19 366 - -
Glsi03g1662 475 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Glsi03g1662 475 SMART serkin_6 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1662 475 Gene3D Transferase(Phosphotransferase) domain 1 18 348 - -
Glsi03g1662 475 Pfam Protein kinase domain 27 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1662 475 SUPERFAMILY Protein kinase-like (PK-like) 24 332 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1662 Glsi-ChrGlsi03 78871668 78873095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1662 23 312 MAP Kinase Kinase Kinase AT2G32510 53.716 2.68e-104 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Glsi03g1662 Pkinase 1e-49 CL0016