Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi03g1620 | ATGAGTCAACTCGGTGTGATATTGCAGGAATCGCTGCAAAGAGAGAGGGAGACAAGAACGATTCTGGGGTTATTGACGGAGCAAATGGAAGCTGTGGATAGAGAGCCTCGGAGGAGGCGGACTCTGAAAGAACGCCTTCGATTCGCCGGAATGGGATGTTGTGGAGCTACCTGGGGTTTCCGTCCAACCACCGTAAGCGTAAGGCACGAAGAAGAAGAAGAAGAACGGCAGCAGCAGCAGCAACGACTCCACGAAACAAATCCGGGTCAAGGCTCGAGCTCATCGGACCCCGATTGTCTAACCCCAACTCCGGCAGGTGCTGGTATGAATCTGGCGGCGGCGTTGGCTGCGGAGCGTCTGTTCCGGGGATCGCAAGAACCGGATTCAGGTAGCCAAGGATCATCGGCCGCGAACAGTTCGGGCGGAAGACGTGGAGGCGGGACGGTGCCGGGAACGCCGTGGAGGGTGTCGCTGATGAGACTGTTGGAGGAAACGGAGGGTGGGGACGGGGAGATGACGATGGAAACAGAGAAAGCAGGAGGAGGGAGTTTGGGGAATGATACAGTGTGCTGCGTGTGCATGGGAAGGAAGAAGGGAGCAGCGTTCATACCGTGTGGGCACACTTTTTGCAGGGTGTGTTCGAGGGAGCTGTGGCTGAATCGAGGAACTTGTCCCCTTTGCAATCGTTCGATCCTCGAGATTCTGGACATTTTCTAA | 717 | 0.5621 | MSQLGVILQESLQRERETRTILGLLTEQMEAVDREPRRRRTLKERLRFAGMGCCGATWGFRPTTVSVRHEEEEEERQQQQQRLHETNPGQGSSSSDPDCLTPTPAGAGMNLAAALAAERLFRGSQEPDSGSQGSSAANSSGGRRGGGTVPGTPWRVSLMRLLEETEGGDGEMTMETEKAGGGSLGNDTVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF | 238 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi03g1620 | 238 | SMART | ring_2 | 190 | 227 | IPR001841 | - | |
Glsi03g1620 | 238 | ProSiteProfiles | Zinc finger RING-type profile. | 190 | 228 | IPR001841 | - | |
Glsi03g1620 | 238 | MobiDBLite | consensus disorder prediction | 66 | 106 | - | - | |
Glsi03g1620 | 238 | MobiDBLite | consensus disorder prediction | 125 | 142 | - | - | |
Glsi03g1620 | 238 | Pfam | Zinc finger, C3HC4 type (RING finger) | 187 | 232 | - | - | |
Glsi03g1620 | 238 | MobiDBLite | consensus disorder prediction | 82 | 100 | - | - | |
Glsi03g1620 | 238 | CDD | RING-HC | 190 | 227 | - | - | |
Glsi03g1620 | 238 | PANTHER | OS01G0917900 PROTEIN | 5 | 238 | - | - | |
Glsi03g1620 | 238 | SUPERFAMILY | RING/U-box | 185 | 235 | - | - | |
Glsi03g1620 | 238 | MobiDBLite | consensus disorder prediction | 66 | 81 | - | - | |
Glsi03g1620 | 238 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 183 | 237 | IPR013083 | - | |
Glsi03g1620 | 238 | MobiDBLite | consensus disorder prediction | 123 | 154 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi03g1620 | Glsi-ChrGlsi03 | 78494972 | 78495688 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi03g1620 | 21 | 238 | C3H Transcription Factor Family | AT4G22250 | 50.220 | 2.38e-59 | 185 |