Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1618 ATGGCCATTAGTACTATTGGGACAATTACAGGTGTTATGAGCTGCTTGTGTTCACAGAACTTTCCGAATGCAACACTTTTCCAGCAGTTTGGACATCTTAGAAGACCCAAAAAGAACTTTAATAAGCTCAAGTCACTGATGGAGGAACTAGATGCTCGGAAGGTAGATGTGAACACTAAACTCAAGCAAATGTGGCTTTGGAAAGGGATGAATCCTAAGGCAGCTGTAAAATTATGGCTGAAAAATGTGGATAGGGTTGCAAGTGAAGTAAGGAAAATTGAGCAAGGAAATGGAAGATCAGGTGGTTTTTCATCATGTTATATTTGTTCAAGAATAAAGTTGGGAAACCTTATTGAAAGAAAGATGTTGGAGGTGAGGGTGCTTCTAGAGAAGGGCCAATTTTCAGATGATTCATTGGCTGATACCCCGCCCAGAAAAGGGCAAAATCTTCCCACAACTAGGTTGGTGAAACATGGATCAACCATGAAATGTTTAAACAGGATTTGGGAGTTCTTACTAAATGACAGAGTGAGAAAAATTGGTATTTATGGGATGGGTGGTGTGGGGAAAACAGCAATCATGACTGAAATTAACAACTGCCTATTGAGAGAGGATGGACTTTTTGATTGTGTTATCTGGGTCAGCACTCCAAAGGAAATGAACCCTGAGAAATTACAGAAGGCTATTGCAGAGAAGTTTGATGTAGATCTTTCACTATTTCAGGATGAGACAACAAGAGCTGCTGCACTTTTTGAAGCTTTCCAAAGAAGAAGGAGATTTGTATTGATTCTAGATGATTTGTGGGAGCCATTCTCTCTTGAAAGAGTTGGAATTCCCTTACCAACCCTAGAGAATGGTTGCAAATTAGTGATAACTACTAGACAATTGAGTGTTTGTAGAGGCATGGAGACTGATAGGGATGTAGAAGTAAAGGTTCTTACAGAGAATGAAGCATGGGATCTCTTCAGGGATAAAGTTGGAGCTGAAGCATTGGCTTCTCCAGGTATAGAAAGAATTGCAAAAGATGTGGCACAAGAGTGTATGGGTTTGCCTCTTGCAGTCCCTTCTTTAGCAAAACTCATAAAGCTAATGGCTCTGGATCTTTCTTGTTCCCGGAAAATTAAAGAACTTCCTCATGGAACAGAACAATTAGGCAACCTGAGACGGTTAAATATCTCAAATACTATGATTAAAAGCTTGCCATCTGGGTTGCTCTCAGCATTAAATCTTTTGGAAGAGTTGTTGGTATGCAATGCTCTTCAATTTCAAATACCATTGCCGCCAACCAGTGCTGAAATTAGCATTGACGAATTCATATCCTCCTCGAGTTTATCTTCTCTTGAAGTAGACTTCTGGAGTTTTGAACTCTATGATCTATATACTAGATCTGGTCACTGGGTTCAGCTGGATAAGTTCAAGTTCAATGTTGGGCCTGGAGAGATCCAAGAAGTCTCAGAGAAAAGGAGTGTAGCATTTCTGGGGATACCCATTATGAAAGGAAGTCCCATTTTAATCCCAGAAAATACTGTTGAGTTGAAGTTTTATGATTGCCACGATATTACAGGGCTAACTACTAGACTTTTGAATGCAGAGAAGCTCAGAAAATGTACACTAATCTGCTGTTACAGTGTAGAAAACATTGTTGACCATGCACAGAATGATTTATCTATGCTGGAGACAATGGTGCTAAGATTTTTGATAAATTTACAGAAAATATGCAGAAAAGTAGTGACACCTTCTACTCTTATGAGCCTGAAGTTCATAAATGTAGAATACTGTCCAAATTTGAAATATCTATTCTCAGGGCATCTCTTGCTCCAACTTTTAAACCTTGAAGAAATCAGAGTGAGCCATTGTGTAAGTATGGAGGACTTGATGAGATGGCAAGAAGAAGAAGACAATATTCATGCTGCTAAAATCCTCTTGCCAAAACTACAGAAGTTGAGGTTGGAATTTATGCCTAAACTAAAAGGGATATATGGTGGATTCATCAGTTTTGGTTCTCAATGTTGTGTTCAAGTCATTTCTTGTGATGCTCTCAAGAGGCTACCCTTTGATCTTGATGATGATGCAGTTGGCACTGACCAGCTCCTATTGGCATCACCTGCTTTGGAAATCAAGGGATCAAGATATTGGTGGGAGTCACTCGAGTGGGATGAACCCTCTGCTAAGCAAATAATGCAAGCTTATTTCGTAGAACTTCCAATGGTGTCAGATCATGTTGCTAGTAGCAGCAGCCTAACAGGTGTGGGTGATACGTAG 2262 0.3979 MAISTIGTITGVMSCLCSQNFPNATLFQQFGHLRRPKKNFNKLKSLMEELDARKVDVNTKLKQMWLWKGMNPKAAVKLWLKNVDRVASEVRKIEQGNGRSGGFSSCYICSRIKLGNLIERKMLEVRVLLEKGQFSDDSLADTPPRKGQNLPTTRLVKHGSTMKCLNRIWEFLLNDRVRKIGIYGMGGVGKTAIMTEINNCLLREDGLFDCVIWVSTPKEMNPEKLQKAIAEKFDVDLSLFQDETTRAAALFEAFQRRRRFVLILDDLWEPFSLERVGIPLPTLENGCKLVITTRQLSVCRGMETDRDVEVKVLTENEAWDLFRDKVGAEALASPGIERIAKDVAQECMGLPLAVPSLAKLIKLMALDLSCSRKIKELPHGTEQLGNLRRLNISNTMIKSLPSGLLSALNLLEELLVCNALQFQIPLPPTSAEISIDEFISSSSLSSLEVDFWSFELYDLYTRSGHWVQLDKFKFNVGPGEIQEVSEKRSVAFLGIPIMKGSPILIPENTVELKFYDCHDITGLTTRLLNAEKLRKCTLICCYSVENIVDHAQNDLSMLETMVLRFLINLQKICRKVVTPSTLMSLKFINVEYCPNLKYLFSGHLLLQLLNLEEIRVSHCVSMEDLMRWQEEEDNIHAAKILLPKLQKLRLEFMPKLKGIYGGFISFGSQCCVQVISCDALKRLPFDLDDDAVGTDQLLLASPALEIKGSRYWWESLEWDEPSAKQIMQAYFVELPMVSDHVASSSSLTGVGDT 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1618 753 FunFam Probable disease resistance protein At1g61300 150 307 - -
Glsi03g1618 753 Gene3D Ribonuclease Inhibitor 580 690 IPR032675 -
Glsi03g1618 753 PRINTS Disease resistance protein signature 179 194 - -
Glsi03g1618 753 PRINTS Disease resistance protein signature 347 361 - -
Glsi03g1618 753 PRINTS Disease resistance protein signature 254 268 - -
Glsi03g1618 753 PRINTS Disease resistance protein signature 580 596 - -
Glsi03g1618 753 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 363 684 - -
Glsi03g1618 753 Gene3D - 150 312 IPR027417 -
Glsi03g1618 753 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 363 IPR027417 -
Glsi03g1618 753 Gene3D Ribonuclease Inhibitor 346 476 IPR032675 -
Glsi03g1618 753 SUPERFAMILY L domain-like 354 666 - -
Glsi03g1618 753 Pfam NB-ARC domain 164 362 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1618 Glsi-ChrGlsi03 78466298 78469309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1618 177 354 WRKY Transcription Factor Family AT5G45050 23.596 1.30e-06 50.1