Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1588 ATGACCCTTGTTGGAGCTCCTTGCCGTGTTGGTTTGGTTGCTCCAATTGATATTAACAAGGGTACTGTAGAAATTATCACCCCTGTGAAACTCATTAGAAAGGGTGATAAGGTTGGCTCTTCTGAAGCTGCTTTGCTTGCAAAACTTGGGATTAGGCCCTTCTCATATGGGCTTGTTGAAAATATGCTTAGATCTCTTATTCTATCTTTTCAGATTGCATCAGTCCATTCCTAG 234 0.4145 MTLVGAPCRVGLVAPIDINKGTVEIITPVKLIRKGDKVGSSEAALLAKLGIRPFSYGLVENMLRSLILSFQIASVHS 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1588 77 Gene3D - 11 55 IPR043164 -
Glsi03g1588 77 Pfam Insertion domain in 60S ribosomal protein L10P 15 51 IPR040637 -
Glsi03g1588 77 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 16 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1588 Glsi-ChrGlsi03 78276686 78277260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1588 4 59 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 64.634 7.91e-26 94.7