Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1563 ATGTCTTACGTTGATCTTACTCCATCTGATAAAGATGTTGAACCTTTCGTGGAGTTTGACCCAACGGGCCGATATGGGAAATACCAGGACTTGCTTGGAGCTGGTTCTTTGAAGAAAGTGTATCGTGCTTTTGATCAAGTAGAAGGCAAAGAGGTGGCTTGGAATCAAGTCTATTTGAACAGATTCATCAATGACGAAGTCATGATCAAAAGAATCTTCTCTGAGGTTGAGCTCCTGAGAAGTTTGAAGAACGAGCATATAGTTACCTTGTACCATGCATGGACAGATACAGAGAAGAAAGGTTTGAACTTTATAACTGAATTTTGTGTTTCTGGGAATCTCAGAGATTACAGGAAGAAGCATCGTCATCTTTCAATAGTAGCTGTGAAGAAGTGGTGCAGGCAAATACTGAGGGGTTTGGAGTACCTCCATCTTCATGAACCCTGCATAATTCATAGAGATCTTAACTGCAGTAACATCTTCATCAATGGAAACTTGGGTCAGATCAAGATTGGAGATTTGGGGTTGGCAATAGCACTAGGGGAGAGTCACAGAGCTCATTCAATCGTTGGGACACCTGAGTTCATGGCACCAGAGCTATATGAAGAGAACTACTCAGAGAAGGTGGATATATACTCTTTTGGAATGTGTTTGCTTGAGATGTCAACAATTGAAATCCCTTATAGTGAGTGTGATAGCGTTGCAAAAATTTACAAGAAGGTGTCCTCTGGTGTAAGGCCTATGGCCTTGAACAAGGTGGAAGACCCAGAAGTGAAGGCTTTTATTGAGAAGTGCCTTGATTCTGGGAGACCATCTGCTTCGGAGCTCCTCAAGGATCCCTTTTTTGATGGGATCGATGAGGAGGACTCTGGCAATCTTAGTCCAGATTTTTCTATTCTTCAATTGGAGAAAATTCAGATTTAA 924 0.4177 MSYVDLTPSDKDVEPFVEFDPTGRYGKYQDLLGAGSLKKVYRAFDQVEGKEVAWNQVYLNRFINDEVMIKRIFSEVELLRSLKNEHIVTLYHAWTDTEKKGLNFITEFCVSGNLRDYRKKHRHLSIVAVKKWCRQILRGLEYLHLHEPCIIHRDLNCSNIFINGNLGQIKIGDLGLAIALGESHRAHSIVGTPEFMAPELYEENYSEKVDIYSFGMCLLEMSTIEIPYSECDSVAKIYKKVSSGVRPMALNKVEDPEVKAFIEKCLDSGRPSASELLKDPFFDGIDEEDSGNLSPDFSILQLEKIQI 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1563 307 Pfam Protein kinase domain 30 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1563 307 Gene3D Transferase(Phosphotransferase) domain 1 110 286 - -
Glsi03g1563 307 FunFam probable serine/threonine-protein kinase WNK9 109 288 - -
Glsi03g1563 307 SUPERFAMILY Protein kinase-like (PK-like) 19 283 IPR011009 -
Glsi03g1563 307 FunFam Probable serine/threonine-protein kinase WNK1 10 107 - -
Glsi03g1563 307 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 283 - -
Glsi03g1563 307 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Glsi03g1563 307 ProSiteProfiles Protein kinase domain profile. 26 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1563 Glsi-ChrGlsi03 78129082 78130005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1563 10 285 MAP Kinase Kinase Kinase AT5G55560 70.504 1.35e-151 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Glsi03g1563 Pkinase 6.9e-51 CL0016