Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1560 ATGCAAACGTCTCAGAAACACACAAGTTCAGCTGGTTTACATTTGAACCACCTTCCTATGATGAAAGATATTGATCCCTACAATTTGTCTCAATACCAAATTTTACAAAGCAATTCATACCATGACATCCATGATAACAGCAGCCAGGGAACCACAGTTTCTTTCGAAACCTACAAGCAGCAATACTTCACCCTGGAATCATACCCTGCAAACACTGGCCTCATAGCTTGTGATTCCCCTTCCTTTGCTAGTGTATCATCTAATAGGAGTCCTTTTTCACCACAAGGTTCTCAGTCATGCCACTCAGATCAGCACCAATACTCTGATAACACCTATGGATCACCGATAAGTGGATGCTCCAGTGCTGATGATGGCAATGAATGGAAGCATAAACTTAAAGAATTGGAGATTTCATTGTTGGGACCTGAGCCAGATATTGTTGACGGTTGCAACTGCAGCTTCATGAGTAGCATCCACCAAACATCTCCCATGCCTCGATGGAATTGGGATCAGATTGTAGAAATGATTCCAAAGTTAGACTTGAGAGAGGTTCTCATTACCTGTGCACGAGCTGTGTCTGATAACGATTTTTCAACAGCAATAGGGTGGATGGATAATGTATTGGGAAAAATGGTGTCAGTTCGTGGGCAGCCAATTCAAAGGTTGGGTGCTTACTTGTTGGAGGGGCTTAGAGCGAAGTTGGAATCTTCAGGGAGTCTAATCTACAATTCCTTGAAATGTGAACAACCAACAAGCGATGATCTAATGAGTTACATGCAGATACTCTATCAGATTTGCCCATATTGGAAGTTTGCTTACATATCTGCAAATGCTGTCATCAAAGAGGCAATGGAAAATGAATCCAGAATTCATATCATTGACTTTCAAATTGCACAGGGCACTCAGTGGATGGCACTTATGAAGGATCTTGCACATCGGCCCGGTGGACCCCCGTTCATTCGCGTAACTGGTGTTGATGATTCCCAATCATTTCATGCTCGGGGTGGAGGACTTAATATTGTAGGAGAACGGTTGTCGGATTTTGCCAAGTCTGAGGGAGTGCCATTTGAGTTCCATAGTGCTGCCATGTCTGGCTGTGAGGTTGAAAGAGAAAATCTTGGAGTTCGACCTGGGGAAGCCCTAGTTGTGAATTTTCCTTATGTTTTGCACCACATGCCAGATGAGAGTGTGAGCACAGAGAACCATAGAGACAGACTATTGAGATTGGTCAAGAGCTTGTCACCCAAGGTTGTGACCCTTGTCGAGCAAGAATCCAACACCAACACTTCTTCCTTCTTACAAAGGTTTCGTGAGACTATGAGTTATTATACTGCTATGTTTGAATCAATAGATGTAGCCCGCCCCAGAGATGATAACAAGCGGATTAATGCAGAGCAGCACTGTGTGGCTCGAGACATTGTCAACATGATAGCTTGTGAGGGGGCTGAGAGGGTGGAAAGGCATGAACTTTTTGGGAAGTGGAGGTCAAGATTTTCCATGGCCGGGTTTACACCATGCCCATTGAGTTCCTCGGTGATCATTGCAGTCAGAAATATGTTGAAGGAGTTTAATGCAAATTACAGGCTTGAACCGAGAGATGGTGCTCTCTATCTTGGCTGGATGAACAGAGCTATGGCTACCTCTTCAGCTTGGAGGTGA 1659 0.4418 MQTSQKHTSSAGLHLNHLPMMKDIDPYNLSQYQILQSNSYHDIHDNSSQGTTVSFETYKQQYFTLESYPANTGLIACDSPSFASVSSNRSPFSPQGSQSCHSDQHQYSDNTYGSPISGCSSADDGNEWKHKLKELEISLLGPEPDIVDGCNCSFMSSIHQTSPMPRWNWDQIVEMIPKLDLREVLITCARAVSDNDFSTAIGWMDNVLGKMVSVRGQPIQRLGAYLLEGLRAKLESSGSLIYNSLKCEQPTSDDLMSYMQILYQICPYWKFAYISANAVIKEAMENESRIHIIDFQIAQGTQWMALMKDLAHRPGGPPFIRVTGVDDSQSFHARGGGLNIVGERLSDFAKSEGVPFEFHSAAMSGCEVERENLGVRPGEALVVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSSFLQRFRETMSYYTAMFESIDVARPRDDNKRINAEQHCVARDIVNMIACEGAERVERHELFGKWRSRFSMAGFTPCPLSSSVIIAVRNMLKEFNANYRLEPRDGALYLGWMNRAMATSSAWR 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1560 552 MobiDBLite consensus disorder prediction 87 108 - -
Glsi03g1560 552 ProSiteProfiles GRAS family profile. 172 552 IPR005202 -
Glsi03g1560 552 Pfam GRAS domain family 181 552 IPR005202 -
Glsi03g1560 552 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 122 541 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1560 Glsi-ChrGlsi03 78116867 78118525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1560 1 552 GRAS Transcription Factor Family AT4G17230 60.217 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi03g1560 GRAS 1.8e-126 CL0063