Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1550 ATGAACTTGAACTATTTATGGCTTGATTTTGTTCTTGTCTATTTGAGAGCTTATATGTATTTATTGAATTTGCATTCTGCAGTGGAGATTGCAATGCCAAATTTTTTTCGTGATTGCGCTATTATCCTCCACATATCACACTTGAATCCAACCACTAAAGCATGCATAGAGATTTTGTGTACCTGCGCCACAGAAGTTTTTATATACAACTCTGAAGATCCATCAATTAATTACAAACACTTGAAGCTACTTCATATGGAATCACAATCTTCTTTCTTGCTGCTCCTTATTTTCTTCCTCCTCTTCTTCTTCTTGTTGCTATGGCTTGCAGAGAGCCGAAAGCAAAACAATAATGCTAAGATTCAAGTCCCTGGGCCATGGAAGCTACCGCTGTTGGGAAACCTTCATCAATTAGCAGTAGCAAGCTCACTTACACACCGTGCTTTTCGAGAACTATCCCGCAAATATGGACCTTTCATGCACCTCCAACTAGGTGAGATTTCTACAGTGGTTGTTTCATCTCCTGAGATTGCCAAGGAGATCATGAAGACCCATGATCTTGCTTTTGCCCAGAGGCCACAAGTGGAATCTACTAAGATAGTATATGGGTCAGAAGATATAGCTTTTGCTCCATATGGGGAATATTGGAGGCAGATGAGGAAAATATGTACATTAGAACTCCTAAGTGTCAAGAGGGTTCAGTCTTTCTCCCATGTTCGTGAAGAAGAGGTAGCCAAGCTCATAGAATCGATTCAATCATCAGTAGGTTCACCAATCAATCTCACTAGTAAGATTTACTCTTTGACAAGTTCTATTGTTACAAGGATAGCATTCGGTAACAAATATAAAGACCAAGAAGAACTTTTGGCTTTGTTAAAGAAATCACTAGAACTGCTTTCGGGATTTGGTCTAGTTGATCTGTTTCCTTCTATGAAACTTATTAATCTCTTCACTGGGGTTAATGCCAAGATGGAGAAGCTTCATGGAAGAATAGACAAGATTTTAGAGGATGTGATCAAGGAAAATCAAGAGAAGCAGACGAGATCCGCAGAAGGAAAGAATGGTTCTGAGGAAGAGAATCTTGTTCAGGTTCTTTCACGAATCCAAAAAAGTGGAGAGCTTGAGATCCCAGTTACAATCAAAAACATCAAAGCTGTTATTTGGGACATGTTTTCTGCTGGAACAGATACATCATCAACAACACTAGAGTGGGCTATGTCAGAAATGATGAGAAATCCAAAAGTGATGAAAAAAGCACAAGCTGAGGTTAGAAAAACTTTTCAAGAAAAGAAAGCAATTCATGAGAGTGATATCGAGGGCCTTAGTTATTTAAAATCAGTTATCAAAGAAACTCTGAGGCTACACCCACCTGCTCCTTTGCTAGTCCCAAGGGAATGCAGAGAACCTTGTAAGATCAATGGGTATGAAATACCCATTAAAACTAGAGTCATTATAAATGCATGGGCACTTGGAAGAGATCCTGCGTATTGGTATGATGCTGAGAGCTTTATACCAGAGAGGTTCCATGGAAGTTCCGTTGACTTTAAAGGGACTAACTTTGAGTATATCCCTTTTGGGGCAGGAAGGAGAATCTGCCCAGGCCTTTCATTTGGGCTAGCTAACATTGAGCTTCCTCTAGCTCGATTGCTATCCCACTTTGACTGGGAACTCCCATATGGAATGAAACCAGAAGATTTGGACATGACCGAAGCTATTGGCATTACGGTAAGAAGGAAAAACAAGCTGTGTTTGATTCCCACCCCTTACAACGATCCTGTTCGTGACACTTGCATTTGA 1797 0.4012 MNLNYLWLDFVLVYLRAYMYLLNLHSAVEIAMPNFFRDCAIILHISHLNPTTKACIEILCTCATEVFIYNSEDPSINYKHLKLLHMESQSSFLLLLIFFLLFFFLLLWLAESRKQNNNAKIQVPGPWKLPLLGNLHQLAVASSLTHRAFRELSRKYGPFMHLQLGEISTVVVSSPEIAKEIMKTHDLAFAQRPQVESTKIVYGSEDIAFAPYGEYWRQMRKICTLELLSVKRVQSFSHVREEEVAKLIESIQSSVGSPINLTSKIYSLTSSIVTRIAFGNKYKDQEELLALLKKSLELLSGFGLVDLFPSMKLINLFTGVNAKMEKLHGRIDKILEDVIKENQEKQTRSAEGKNGSEEENLVQVLSRIQKSGELEIPVTIKNIKAVIWDMFSAGTDTSSTTLEWAMSEMMRNPKVMKKAQAEVRKTFQEKKAIHESDIEGLSYLKSVIKETLRLHPPAPLLVPRECREPCKINGYEIPIKTRVIINAWALGRDPAYWYDAESFIPERFHGSSVDFKGTNFEYIPFGAGRRICPGLSFGLANIELPLARLLSHFDWELPYGMKPEDLDMTEAIGITVRRKNKLCLIPTPYNDPVRDTCI 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1550 598 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 525 534 IPR017972 GO:0005506|GO:0016705
Glsi03g1550 598 SUPERFAMILY Cytochrome P450 124 588 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1550 598 Gene3D Cytochrome P450 111 587 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1550 598 CDD CYP71-like 155 582 - -
Glsi03g1550 598 PRINTS P450 superfamily signature 523 532 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1550 598 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1550 598 PRINTS P450 superfamily signature 393 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1550 598 PANTHER OS08G0105600 PROTEIN 147 590 - -
Glsi03g1550 598 FunFam Cytochrome P450 71D8 114 586 - -
Glsi03g1550 598 PRINTS E-class P450 group I signature 532 555 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1550 598 PRINTS E-class P450 group I signature 402 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1550 598 PRINTS E-class P450 group I signature 382 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1550 598 PRINTS E-class P450 group I signature 445 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1550 598 PRINTS E-class P450 group I signature 153 172 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1550 598 PRINTS E-class P450 group I signature 268 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1550 598 PRINTS E-class P450 group I signature 486 510 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1550 598 PRINTS E-class P450 group I signature 177 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1550 598 PRINTS E-class P450 group I signature 522 532 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1550 598 Pfam Cytochrome P450 124 577 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1550 Glsi-ChrGlsi03 78030016 78037800 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1550 100 592 Cytochrome P450 AT3G26300 41.948 5.86e-138 409