Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1549 ATGGAATCACAATCTTCTTTCTTGCTGCTCCTTATTTTCTTCCTCCTCTTCTTCTTCTTGTTGCTATGGCTTGCAGAGAGCCGAAAGCAAAACAATAATGCTAAGATTCAAGTCCCTGGGCCATGGAAGCTACCGCTGTTGGGAAACCTTCATCAATTAGCAGTAGCAAGCTCACTTACACACCGTGCTTTTCGAGAACTATCCCGCAAATATGGACCTTTCATGCACCTCCAACTAGGTGAGATTTCTACAGTGGTTGTTTCATCTCCTGAGATTGCCAAGGAGATCATGAAGACCCATGATCTTGCTTTTGCCCAGAGGCCACAAGTGGAATCTACTAAGATAGTATATGGGTCAGAAGATATAGCTTTTGCTCCATATGGGGAATATTGGAGGCAGATGAGGAAAATATGTACATTAGAACTCCTAAGTGTCAAGAGGGTTCAGTCTTTCTCCCATGTTCGTGAAGAAGAGGTAGCCAAGCTCATAGAATCGATTCAATCATCAGTAGGTTCACCAATCAATCTCACTAGTAAGATTTACTCTTTGACAAGTTCTATTGTTACAAGGATAGCATTCGGTAACAAATATAAAGACCAAGAAGAACTTTTGGCTTTGTTAAAGAAATCACTAGAACTGCTTTCGGGATTTGGTCTAGTTGATCTGTTTCCTTCTATGAAACTTATTAATCTCTTCACTGGGGTTAATGCCAAGATGGAGAAGCTTCATGGAAGAATAGACAAGATTTTAGAGGATGTGATCAAGGAAAATCAAGAGAAGCAGACGAGATCCGCAGAAGGAAAGAATGGTTCTGAGGAAGAGAATCTTGTTCAGGTTCTTTCACGAATCCAAAAAAGTGGAGAGCTTGAGATCCCAGTTACAATCAAAAACATCAAAGCTGTTATTTGGGACATGTTTTCTGCTGGAACAGATACATCATCAACAACACTAGAGTGGGCTATGTCAGAAATGATGAGAAATCCAAAAGTGATGAAAAAAGCACAAGCTGAGGTTAGAAAAACTTTTCAAGAAAAGAAAGCAATTCATGAGAGTGATATCGAGGGCCTTAGTTATTTAAAATCAGTTATCAAAGAAACTCTGAGGCTACACCCACCTGCTCCTTTGCTAGTCCCAAGGGAATGCAGAGAACCTTGTAAGATCAATGGGTATGAAATACCCATTAAAACTAGAGTCATTATAAATGCATGGGCACTTGGAAGAGATCCTGCGTATTGGTATGATGCTGAGAGCTTTATACCAGAGAGGTTCCATGGAAGTTCCGTTGACTTTAAAGGGACTAACTTTGAGTATATCCCTTTTGGGGCAGGAAGGAGAATCTGCCCAGGCCTTTCATTTGGGCTAGCTAACATTGAGCTTCCTCTAGCTCGATTGCTATCCCACTTTGACTGGGAACTCCCATATGGAATGAAACCAGAAGATTTGGACATGACCGAAGCTATTGGCATTACGGTAAGAAGGAAAAACAAGCTGTGTTTGATTCCCACCCCTTACAACGATCCTGTTCGTGACACTTGCATTTGA 1542 0.4112 MESQSSFLLLLIFFLLFFFLLLWLAESRKQNNNAKIQVPGPWKLPLLGNLHQLAVASSLTHRAFRELSRKYGPFMHLQLGEISTVVVSSPEIAKEIMKTHDLAFAQRPQVESTKIVYGSEDIAFAPYGEYWRQMRKICTLELLSVKRVQSFSHVREEEVAKLIESIQSSVGSPINLTSKIYSLTSSIVTRIAFGNKYKDQEELLALLKKSLELLSGFGLVDLFPSMKLINLFTGVNAKMEKLHGRIDKILEDVIKENQEKQTRSAEGKNGSEEENLVQVLSRIQKSGELEIPVTIKNIKAVIWDMFSAGTDTSSTTLEWAMSEMMRNPKVMKKAQAEVRKTFQEKKAIHESDIEGLSYLKSVIKETLRLHPPAPLLVPRECREPCKINGYEIPIKTRVIINAWALGRDPAYWYDAESFIPERFHGSSVDFKGTNFEYIPFGAGRRICPGLSFGLANIELPLARLLSHFDWELPYGMKPEDLDMTEAIGITVRRKNKLCLIPTPYNDPVRDTCI 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1549 513 FunFam Cytochrome P450 71D8 29 501 - -
Glsi03g1549 513 CDD CYP71-like 70 497 - -
Glsi03g1549 513 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1549 513 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1549 513 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1549 513 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1549 513 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1549 513 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1549 513 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1549 513 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1549 513 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1549 513 PANTHER OS08G0105600 PROTEIN 63 505 - -
Glsi03g1549 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Glsi03g1549 513 SUPERFAMILY Cytochrome P450 39 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1549 513 Pfam Cytochrome P450 39 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1549 513 Gene3D Cytochrome P450 26 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1549 513 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1549 513 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1549 513 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1549 Glsi-ChrGlsi03 78010183 78012309 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1549 15 507 Cytochrome P450 AT3G26300 41.948 2.38e-139 409