Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi03g1548 | ATGACAGCAAAAGATAAAGGCCAAGAATCCTATATCGTTGTTTCATGTCCACATGTTGAGATTTTTTTTCGTGATTGCGCTATTATCCTCCACATATCACACTTGAATCCAACCACTAAAGCATGCATAGAGATTTTGCGTACCTGCGCCACAGAAGTTTTTATATACAGCTCTGAAGATCCATCAATTAATTACAAACACTTGAAGCTAATCCATATGGAATCACAATCTTCTTTCTTGTTGCTCCTTATTTCCTTCCTCCTCCTCTTCTTGTTGCTATGGCTTGCAGGGAGCCGAAAGCAAAACAATAATGCTAATATTCAAGTCCCTGGGCCATGGAAGCTACCTCTGTTGGGAAACCTTCATCAACTAGCACTAGCGAGCTCACTTCCACACCATGCTCTTCGAGAACTATCCCACAAATATGGACCTTTCATGCACCTCCAACTGGGTGAGATTTCTACAGTGGTTGTTTCATCTCCTGAGATTGCCAAGGAGATCATGAAGACCCATGATCTTGCTTTTGCCCAGAGGCCACAAATTGAAACTGCTAAGGTAGCATATGGGTCAGAAAATATAGCTTTTGCTCCATATGGAGATTATTGGAGGCAGATGAGGAAAATATGTACATTAGAGCTCCTAAGTGCCAAGAGGGTTCAGTCTTTCTCCTATGTTCGTGAAGAAGAGGTAGCTAAGTTCATAGCATCGGTTCAATCGTCAGTAGGTTCACCAATCAATCTCACTAGTAAGATTTACTCTTTGACAAGTTCTATAGTTACAAGGATAGCGTACGGTAACAAATCTAAAGACCAAGAAGAACTTGTGGCTTTGCTAAGGAAATCACTAGAACTGCTTTCGGGATTTGGTCTGGCTAATTTATTTCCTTCTATGAAATTTGTTCATCTCTTTACTGGAGTTAAAGCCAAGATGGAGAAGATTCATAGAAGAATAGACGTGATTTTAGAGGATGTCATCAAGGAAAATCAAGAGAAGCGGGCGAGATCCGCTGAAGGAAAGAATGGTTCTGAGGAAGAGAATCTTGTTCAGGTTCTTTCACGAATCCAAAAAAGTGGCAACCTTGAGATCCCAGTTACAATCAACAATATCAAAGCCGTTATTTGGGACATATTTTCTGGTGGAACTGATACATCAGCAACAACGCTGGAGTGGGCTATGTCAGAAATGATGAGAAATCCGAAACTGATGAAGAAAGCACAAGCTGAGATTAGAAAAACTTTTCAAGGGAAGAAAGAAATCCACGAGAGTGATCTAGACGGCCTTGGTTATTTAAAATCAGTGATAAAAGAAACCCTGAGACTACACCCACCTGTTCCTTTACTAGTCCCAAGGGAATGCAGAGAATCCTGCAAGATCAATGGGTATGAAGTACCCATTAAAACTAGAGTCATCATAAACGCTTGGGCACTTGGAAGAGATCCTGGGTATTGGTATGATGCTGAGAGCTTTATACCAGAGAGGTTCCATGGAAGTTCTATTGATTTTAAAGGGGCTAACTTTGAGTATATCCCTTTTGGGGCAGGAAGGAGAATGTGCCCAGCCATTTCATTTGGGTTAGCTAGCATTGAGCTTCCTCTAGCTCGATTGCTATTCCATTTTGACTGGGAACTCCCATATGGAATGAAACCAGAAGATTTGGACATGACGGAAGCTATTGCCGTTACGGCAGGAAGGAAAAACAAGCTGTGCTTGATTCCCACCCGTTACAACGACCCTCTTCATGACACTTGCATTTGA | 1755 | 0.416 | MTAKDKGQESYIVVSCPHVEIFFRDCAIILHISHLNPTTKACIEILRTCATEVFIYSSEDPSINYKHLKLIHMESQSSFLLLLISFLLLFLLLWLAGSRKQNNNANIQVPGPWKLPLLGNLHQLALASSLPHHALRELSHKYGPFMHLQLGEISTVVVSSPEIAKEIMKTHDLAFAQRPQIETAKVAYGSENIAFAPYGDYWRQMRKICTLELLSAKRVQSFSYVREEEVAKFIASVQSSVGSPINLTSKIYSLTSSIVTRIAYGNKSKDQEELVALLRKSLELLSGFGLANLFPSMKFVHLFTGVKAKMEKIHRRIDVILEDVIKENQEKRARSAEGKNGSEEENLVQVLSRIQKSGNLEIPVTINNIKAVIWDIFSGGTDTSATTLEWAMSEMMRNPKLMKKAQAEIRKTFQGKKEIHESDLDGLGYLKSVIKETLRLHPPVPLLVPRECRESCKINGYEVPIKTRVIINAWALGRDPGYWYDAESFIPERFHGSSIDFKGANFEYIPFGAGRRMCPAISFGLASIELPLARLLFHFDWELPYGMKPEDLDMTEAIAVTAGRKNKLCLIPTRYNDPLHDTCI | 584 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi03g1548 | 584 | PRINTS | E-class P450 group I signature | 472 | 496 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi03g1548 | 584 | PRINTS | E-class P450 group I signature | 431 | 449 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi03g1548 | 584 | PRINTS | E-class P450 group I signature | 368 | 385 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi03g1548 | 584 | PRINTS | E-class P450 group I signature | 163 | 184 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi03g1548 | 584 | PRINTS | E-class P450 group I signature | 388 | 414 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi03g1548 | 584 | PRINTS | E-class P450 group I signature | 508 | 518 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi03g1548 | 584 | PRINTS | E-class P450 group I signature | 254 | 272 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi03g1548 | 584 | PRINTS | E-class P450 group I signature | 139 | 158 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi03g1548 | 584 | PRINTS | E-class P450 group I signature | 518 | 541 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi03g1548 | 584 | PRINTS | P450 superfamily signature | 379 | 396 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi03g1548 | 584 | PRINTS | P450 superfamily signature | 432 | 443 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi03g1548 | 584 | PRINTS | P450 superfamily signature | 509 | 518 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi03g1548 | 584 | Coils | Coil | 326 | 346 | - | - | |
| Glsi03g1548 | 584 | PANTHER | OS08G0105600 PROTEIN | 133 | 575 | - | - | |
| Glsi03g1548 | 584 | CDD | CYP71-like | 141 | 568 | - | - | |
| Glsi03g1548 | 584 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 511 | 520 | IPR017972 | GO:0005506|GO:0016705 | |
| Glsi03g1548 | 584 | Gene3D | Cytochrome P450 | 102 | 576 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi03g1548 | 584 | Pfam | Cytochrome P450 | 110 | 568 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi03g1548 | 584 | FunFam | Cytochrome P450 71D8 | 101 | 572 | - | - | |
| Glsi03g1548 | 584 | SUPERFAMILY | Cytochrome P450 | 110 | 571 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi03g1548 | Glsi-ChrGlsi03 | 77991934 | 77994552 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi03g1548 | 83 | 578 | Cytochrome P450 | AT3G26300 | 42.323 | 2.75e-143 | 422 |