Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1527 ATGGCAAGGTCAGATAAGCAAGCTCTGGTGGAGAGTACCATGGTAGCAATGGGTCTTCAGGATTGTGCCGATACAGTGATTGGAAACTGGCATTTGGGTGGGATCAGTGGGGGAGAAAAGAGAAGAGTTAGCATAGCTTTGGAAATCTTGATGATACCCAGATTGCTCTTCCTTGATGAGCCAACCAGTGGACTTGACAGTGGCAAAACTGTTTACTTTGGTCAAGCTTCGGAAGCATACCAGGAAAGAATCTCCTTATTTACCTTTTCCTCTTCTGCTAAATTTGATAGGCTGACCTCTAAGAACAGATTACCCCATCTTCTATTGCATGGTCCTCCTGGCACGGGCAAAACATCAACTATTCTCGCTGTGGCCCGCAAACTATATGGAGCACAATATCTCAATATGATTTGGAGGCTTAAGGCATCAGATGATAGGGGAATTGATGTCGTCCGCCAACAGATCCAAGATTTTGCTAGCACCCAGAGCTTTTCATTTAGAGTCAAGTCCTCTATAAAGATGATCTTGTTAGATGGGGCAAATGCCATGACAAAGGATGCACAATTTGCATTACGTAGAGGATTTAGCATATGA 594 0.4394 MARSDKQALVESTMVAMGLQDCADTVIGNWHLGGISGGEKRRVSIALEILMIPRLLFLDEPTSGLDSGKTVYFGQASEAYQERISLFTFSSSAKFDRLTSKNRLPHLLLHGPPGTGKTSTILAVARKLYGAQYLNMIWRLKASDDRGIDVVRQQIQDFASTQSFSFRVKSSIKMILLDGANAMTKDAQFALRRGFSI 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1527 197 Pfam ATPase family associated with various cellular activities (AAA) 107 186 IPR003959 GO:0005524|GO:0016887
Glsi03g1527 197 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 68 - -
Glsi03g1527 197 Pfam ABC transporter 10 63 IPR003439 GO:0005524
Glsi03g1527 197 Gene3D - 1 80 IPR027417 -
Glsi03g1527 197 CDD AAA 102 193 - -
Glsi03g1527 197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 193 IPR027417 -
Glsi03g1527 197 Gene3D - 81 195 IPR027417 -
Glsi03g1527 197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 68 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1527 Glsi-ChrGlsi03 77848270 77851393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1527 95 193 Core DNA Replication Machinery Family AT1G77470 80.808 4.75e-50 164