Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1488 ATGGAGGGCCAGCAAGACAATACCCAAATGTTTAAGTATGGTTATAGTGGCAGTAGTAGTAGTAGCGGCGTGTGCGAGATAGAGGAAGAGGAAGAGCAGCAGCAGCAGCAACACCATGGGGCTATGGAGTCCATTAAAGAAGAGCAAGAAGAGGGGGAAGATCAGAACTGTGTTTATGTGGGAGTGGGGAAGAGCGAGACGAGCATGGAAGCTCTTTCGTGGGCGCTGAGGAACTTGATAACTAATAATGACCCCTCTTCTACCGTGGTCTATCTCATCCATGTTTTCCCAGAGATCAAACACATTCCAAATCCATTGGGAACGGGAATGATTCCAAAGAACCAAGTGAGTGCTGAGCAAGTGGAGAGCCATATGGCCCAGGAAAGAGGCAAGAGGAGAGAACTCCTTCACAAGTTCCTCCAATCATGCTCTGCTTCCAAGATTAAGGTGGACACCATCCTTATTGAGAGTGACTTGGTGGCAAAGGCTATCATCGACCTTATTCCCATTCTTAACATAAGAAGCTTAGTGATCGGAACCAACAAATCCAATCTAAGAAAATCAAGATTAAGGAAAGGGAATGGAATAGCTGATCAGATACTGCAAAATGCTCCAGAAAGTTGCAGGGTGAGAATCGTAAGTGAAGGGAAGGAAGTAAATGAACAGATGATGTTGATGTCGCATTCTCCTCGTGCCCCCTCCCCTCGGGCGAATGCTAATGATCACACTTCCATGACCATGAAAGAAGATCATCAAATTCTACCTCGGTCCATCAATTCTGGTTGTGAAATCGGGCATGAAATGTCAGCTACGTCATCCGATGAAGAAGAAACCTTGAGCTTCTGCACTTGTGGTTTTGATGGGTTCAAGATCAGAAACAAAGTGTTTCACTCCGAAGATTGTGATGGGGATGAAGATTCGGAGGAGCTGTTTGAGATTGATCTCAAGAAGGGACCTTTGGTTGCAATCAGAGAAGAAGAGTGCGAGAGCAGCGTGTTCTCTATTGATATTCATGATCAGAAGAGGAAGAAGGATGAGGATGAGGACGAGGATGATGTAGTTTGTGTAGCTGTGGGCGATGCTGGTGGATCGAGCTTGGAAGCATTTTCATGGGCGTTCAACCACACTCTGACTTCCTCTACTACTCTCTATCTCCTCCATGTCTTCCCGGTGATTAGGCTCATCCCAAGTCCAATGGGAAAACTTCCAAGAAGTCATGTAAATTCAGAGTATGTTAACCTCTACCTCAGCCAAGAGAGAGCCAAGAGAAAAGTGCTTCTTCAAAAGTTCATTGACTTGTGCCTTGCTTCAAAGGTCAAGGTGGAGATGATGCTCATTGAGGGTGACAACGTAGCCAAAGCCATTGTAGACCTTGTTAAGAATCTTAGTATAAGAAAATTGGTGATTGGAACTACCAAATCTAGTCTAAGCAAAAGGCGAAATGCCATAGCAGATCAGGTACTGAAGAATGCACCAGAAAACTGTGACGTTAAAGTCATATGCGAAGGGAAGGATGTGATTTACCAGATGATTGGGTGCGGTTCGCCACGTTCTAGTGACAGTGGCACTTCCAGATCTTCACAGGAAGAAGATGAACCCCGTGGATTTGTTTCCTTTAGGCGCTTTTTTGGAGGCAAAATTTTTTCCCCAAGATGA 1656 0.4511 MEGQQDNTQMFKYGYSGSSSSSGVCEIEEEEEQQQQQHHGAMESIKEEQEEGEDQNCVYVGVGKSETSMEALSWALRNLITNNDPSSTVVYLIHVFPEIKHIPNPLGTGMIPKNQVSAEQVESHMAQERGKRRELLHKFLQSCSASKIKVDTILIESDLVAKAIIDLIPILNIRSLVIGTNKSNLRKSRLRKGNGIADQILQNAPESCRVRIVSEGKEVNEQMMLMSHSPRAPSPRANANDHTSMTMKEDHQILPRSINSGCEIGHEMSATSSDEEETLSFCTCGFDGFKIRNKVFHSEDCDGDEDSEELFEIDLKKGPLVAIREEECESSVFSIDIHDQKRKKDEDEDEDDVVCVAVGDAGGSSLEAFSWAFNHTLTSSTTLYLLHVFPVIRLIPSPMGKLPRSHVNSEYVNLYLSQERAKRKVLLQKFIDLCLASKVKVEMMLIEGDNVAKAIVDLVKNLSIRKLVIGTTKSSLSKRRNAIADQVLKNAPENCDVKVICEGKDVIYQMIGCGSPRSSDSGTSRSSQEEDEPRGFVSFRRFFGGKIFSPR 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1488 551 MobiDBLite consensus disorder prediction 31 46 - -
Glsi03g1488 551 MobiDBLite consensus disorder prediction 1 54 - -
Glsi03g1488 551 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 360 500 - -
Glsi03g1488 551 Pfam Universal stress protein family 354 492 IPR006016 -
Glsi03g1488 551 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 12 252 - -
Glsi03g1488 551 MobiDBLite consensus disorder prediction 515 535 - -
Glsi03g1488 551 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 59 205 - -
Glsi03g1488 551 Gene3D HUPs 349 506 IPR014729 -
Glsi03g1488 551 Gene3D HUPs 51 224 IPR014729 -
Glsi03g1488 551 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1488 Glsi-ChrGlsi03 77300221 77307484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1488 356 524 U-box Gene Family AT4G25160 31.977 2.75e-16 80.5