Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1487 ATGGACTCAAAAACTAGTGCTAGAGCTGCCCAAAAACAGCATCAGAAGACTGCTGGGATTCAAACAATAGAGGAAAAAAACAGCAGGTCTTCTTTGCTGCAAGTTTCAAAGAGAGGCAAACCTGAACTGGCTGCACCTGAAGATTTATCAAGATCTGTTCAAAACACATCAAAGCAGTATACTGGAGAAACTTCTGAAAACAAGAAATTGGGAATTTCAAACCAAAAGGAGTCTGCTGATTCTTTGATTAATAAATTTGGTTCTAGCGTTTCCTTATCTGTTCATGAAAAAGCATCTGGAGAAGTGCACCATGTTGATAATGGGAATAGAGGTTTTCAGGAAAGCTCTATTGATAAAGAAAAGAAGACATCAGAGTATGGAAGTGTGAAGAACAGTTCTGTTTCTGCCAAAGTTAGTGATGGGGCTAGCAGTCTGGCGAAGACTAGTGGAAGTGCCAAGATTAGTGATCGAGCTGATTTTGTTGAGAGTGGTAAGAGCAGTATCTGCAGAGGAAGTACAAGCAGTGATGTGAGTGATGAGAGCACCTGTAGCAGCTTTAGTAGCAGTATCAACAAGCCTCACAAGGCAAATGACTTGAGATGGGAAGCCATCCAAGCAGTCAGAGTTAAAGATGGAGTATTGGGTTTAGGTCACTTTAGACTACTAAAGAGGTTGGGGTGTGGGGATATTGGGAGTGTGTATCTCTCTGAGTTGAGTGGAACTAAATGTTATTTTGCGATGAAGGTAATGGACAAAGGGTCCCTGGCAAGTCGTAAAAAGCTGCTTCGTGCTCAGACAGAAAGAGAAATACTGCAGTCACTAGATCATCCGTTTCTCCCAACTTTGTATACCCATTTTGAGACAGAGAAGTTCTCGTGCTTGGTAATGGAATTCTGCCCAGGTGGAGACCTGCACACTCTTAGGCAGAGACAGCCAGGGAAGCATTTTCCTGAGCAAGCAGTAAAATTTTATGTCGCAGAGGTCCTGCTGGCTTTGGAGTACCTGCACATGCTTGGTATTGTCTACCGTGACCTCAAGCCAGAAAATGTCCTTGTTAGGGACGATGGACATATTATGCTCTCCGACTTTGACCTTTCTCTCCGTTGTGCTGTTAGTCCTACTCTTGTTAAAACCTCATCCATGGAATCTGAGCCCTTACGAAAGAATCCTGTATATTGTGTCCAGCCTGCTTGTATTGAGCCACCTTCCTGCATCCAGCCATCCTGTGTTGCTCCTACAACGTGCTTTTCACCCAGGCTCTTTTCTAGCAAATCAAAGAAGGATCGGAAACCCAAAACTGAAATTGGAAACCAAGTGAGTCCATTACCTGAGCTCATGGCAGAGCCTACTGATGCTCGATCAATGTCATTTGTTGGGACCCATGAATACTTGGCACCTGAGATCATTAAGGGCGAAGGTCATGGGAGTGCAGTTGATTGGTGGACTTTTGGAGTCTTTCTATACGAGCTGTTGTTTGGTAAAACTCCTTTTAAGGGATCTGGGAACCGAGCTACATTGTTTAATGTTGTAGGTCAGCCTCTCCGGTTTCCAGAATCACCCGTTGTCAGTTTTGCTGCAAGGGATCTTATAAGGGGTTTGCTCGTAAAGGAACCACAGCACAGGTTGGCATATAAACGAGGGGCTACTGAGATTAAGCAACATCCCTTTTTTGAAGGTGTGAATTGGGCATTGATTCGTTGTGCTACCCCACCCGAGATCCCAAAGGCTGTAGAGTATGAGAAGATACCTTCCCCAGCCTCATCAGCCAGTGAAAAGGCTGTTAACCATATGTCAATTCCTGATCAGAAAGGTTCGGGTAATTATCTGGAGTTTGATTTCTTTTAG 1845 0.4407 MDSKTSARAAQKQHQKTAGIQTIEEKNSRSSLLQVSKRGKPELAAPEDLSRSVQNTSKQYTGETSENKKLGISNQKESADSLINKFGSSVSLSVHEKASGEVHHVDNGNRGFQESSIDKEKKTSEYGSVKNSSVSAKVSDGASSLAKTSGSAKISDRADFVESGKSSICRGSTSSDVSDESTCSSFSSSINKPHKANDLRWEAIQAVRVKDGVLGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKTSSMESEPLRKNPVYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKTEIGNQVSPLPELMAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEYEKIPSPASSASEKAVNHMSIPDQKGSGNYLEFDFF 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1487 614 SUPERFAMILY Protein kinase-like (PK-like) 194 581 IPR011009 -
Glsi03g1487 614 Gene3D Transferase(Phosphotransferase) domain 1 303 378 - -
Glsi03g1487 614 SMART serkin_6 219 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1487 614 MobiDBLite consensus disorder prediction 10 35 - -
Glsi03g1487 614 Pfam Protein kinase domain 454 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1487 614 Pfam Protein kinase domain 220 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1487 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 340 352 IPR008271 GO:0004672|GO:0006468
Glsi03g1487 614 Gene3D Transferase(Phosphotransferase) domain 1 450 575 - -
Glsi03g1487 614 CDD STKc_phototropin_like 218 575 - -
Glsi03g1487 614 FunFam serine/threonine-protein kinase D6PK-like 303 370 - -
Glsi03g1487 614 MobiDBLite consensus disorder prediction 49 74 - -
Glsi03g1487 614 FunFam Serine/threonine-protein kinase AGC1-7 450 575 - -
Glsi03g1487 614 MobiDBLite consensus disorder prediction 1 74 - -
Glsi03g1487 614 MobiDBLite consensus disorder prediction 100 133 - -
Glsi03g1487 614 FunFam Serine/threonine-protein kinase D6PK-like 217 302 - -
Glsi03g1487 614 PANTHER FLIPPASE KINASE 1-RELATED 21 581 - -
Glsi03g1487 614 MobiDBLite consensus disorder prediction 100 126 - -
Glsi03g1487 614 Gene3D Phosphorylase Kinase; domain 1 217 302 - -
Glsi03g1487 614 ProSiteProfiles Protein kinase domain profile. 219 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1487 Glsi-ChrGlsi03 77296430 77299646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1487 25 614 AGC Kinase Gene Family AT5G47750 77.196 0.0 879
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Glsi03g1487 Pkinase 1.7e-36 CL0016