Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1462 ATGAAGTTTCAAAAGCATTCCATTTTCTTCTTAGGATTCTTTCTTTTTTCTCTCTTCCAAGCACCTGCTTTTGCAGCAAAAAAGGAAGTGGCTGCTGACATTGCAGGTGTTTGGCCGGAATCTCATAGCTTTGCTGATGAGGGTATGGGACCCATTCCTGCCAGGTGGAAGGGATCCTGTGTGGTGGATGATCCTACTGGCTTCCATTGTAACAGGAAGCTAATAGGAGCAAGGTACTTCAACAAGGGCTTTCTTAACCGTGCTAAAGAAGAGAATGATCATCTACCGAAGAACACCACAATATATTACACCGCAAGAGACACAGGAGGCCATGGTTCTCACACGCTATCAACAGCAGGAGGTAACATGGTACCTGGGGCAAACATCTTCGGATTGGCCAAAGGGACAGCCTCAGGTGGCTCTCCTAAGGCCAGAGTTGCTGCCTACAAGGTTTGCTGGCCACCCATCTCCTTCTACGAGTGTCTGGATGCTGACATTGTGGCAGGCTTTGATATGGCTATCCATGATGGGGTAGATGTGCTTTCTGTTTCTCTTGGAGGGTATCCTACGGATTTCAGGGATGATCTTCTTGCAATTGCTTCATTCCATGCTTTTAAGAAGGGAATTACCGTGGTCTGTTCTGGAGGAAATTCTGGACCTTATGCTACAACTGTCACTAATTTTGCTCCTTGGATATTTACCATTGCTGCAAGTACTTTGGATAGAGAATTTGAAACTGCCGTTCAACTTCAGAATGGAAAGCAATTCCAGGGAAAAAGTCGCTCAATAGCTTTGCCAGAAAAGAAACTTTATCCGCTCATTCTTGCTTCACATGCAAAAACTGCAACAGCAAATGTTACAGCATCTTTGGTGTGTGAAGATGGATCTCTTGACCCCAAGAGAGTGAAGGGCAAAATCTTGGTTTGTCTTAGAGGTCTGAATCTTAGAATGGAGAAGAGCAATGCTGCTCAGAAGGCTGGTGCCGTTGGGATGATTCTTTATAATGATAAGTCTAATAACAACGAAACCGTTCCTGATCCTTTTTTACTCCCATCAGCTCACATCAACTATGAGGATGGTCTTCAACTTGTTGCCTACCTCAATTCAGCCAGAAATCCAATGGGATATATTTATCCACCCAAAGACAAGTTCCAGAAGAAGCCTAGTCCGTATGTTGCATCTTTCTCCTCCAGAGGGCCAAGCTTTATAACGTCTGAGATCCTGAAGCCTGATGTTACTGCTCCTGGTGTGAATATCATTGCTGCCTTTTCACAAGTAGTGGCCCCTACAGCTTTTGACTTTGACAAACGTAGGGTTCCTTATACCCTTATGTCTGGAACATCCATGTCTTGTCCTCATGTTTCTGGAGTTGTTGGCCTTCTCAAGACTCTTCATCCTGATTGGAGCTCATCAGCTATCAAATCAGCAATCATGACAACCGCCAGGACAAGGGACAACACAGGTCATCCAATGCTTGCCGAAGAAACAATGGCTAAGGCAACACCGTTTGACTATGGTGCAGGCCACATCAGGCCAAACAAAGCCGCGGACCCAGGCCTGGTCTATGACTTAACCATCAACGACTACCTAGACTTCCTCTGTGCCCTTGGCTACAACCAAACCTGGATCAAGCTCTTCTCTGGTGCACCACACACTTGCCCCTACTCAATGAACCTTGTGGACTTCAACTACCCTTCAATATCCATCCCAACCCTCTATGGCTCAGTTAACGTAACCAGAACTCTGAAAAACGTGGGATCACCAGGCACTTACTCGGCCAGAATCCATCCAATTTCTGGCGTTGCCATCACTGTGGAGCCAAATGTATTGAAGTTTGAGAAGATTGGGGAAGAGAAGAGCTTTAAGTTGAAAATAGAAGTGAAGAGGCATGGCACCCAAACAGCATTTGGAGGATTAACTTGGTCTGATGGGAAGCATTTTGTGAGGAGTCCAATTGCAGTTGGGGGTGTTAATGTCGACTAG 1983 0.4564 MKFQKHSIFFLGFFLFSLFQAPAFAAKKEVAADIAGVWPESHSFADEGMGPIPARWKGSCVVDDPTGFHCNRKLIGARYFNKGFLNRAKEENDHLPKNTTIYYTARDTGGHGSHTLSTAGGNMVPGANIFGLAKGTASGGSPKARVAAYKVCWPPISFYECLDADIVAGFDMAIHDGVDVLSVSLGGYPTDFRDDLLAIASFHAFKKGITVVCSGGNSGPYATTVTNFAPWIFTIAASTLDREFETAVQLQNGKQFQGKSRSIALPEKKLYPLILASHAKTATANVTASLVCEDGSLDPKRVKGKILVCLRGLNLRMEKSNAAQKAGAVGMILYNDKSNNNETVPDPFLLPSAHINYEDGLQLVAYLNSARNPMGYIYPPKDKFQKKPSPYVASFSSRGPSFITSEILKPDVTAPGVNIIAAFSQVVAPTAFDFDKRRVPYTLMSGTSMSCPHVSGVVGLLKTLHPDWSSSAIKSAIMTTARTRDNTGHPMLAEETMAKATPFDYGAGHIRPNKAADPGLVYDLTINDYLDFLCALGYNQTWIKLFSGAPHTCPYSMNLVDFNYPSISIPTLYGSVNVTRTLKNVGSPGTYSARIHPISGVAITVEPNVLKFEKIGEEKSFKLKIEVKRHGTQTAFGGLTWSDGKHFVRSPIAVGGVNVD 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1462 660 Gene3D Peptidase S8/S53 domain 36 529 IPR036852 GO:0004252|GO:0006508
Glsi03g1462 660 FunFam p69E protein-like 533 656 - -
Glsi03g1462 660 Pfam PA domain 286 363 IPR003137 -
Glsi03g1462 660 SUPERFAMILY Subtilisin-like 64 520 IPR036852 GO:0004252|GO:0006508
Glsi03g1462 660 Gene3D - 533 656 - -
Glsi03g1462 660 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 6 654 IPR045051 -
Glsi03g1462 660 Pfam Subtilase family 88 484 IPR000209 GO:0006508|GO:0008236
Glsi03g1462 660 FunFam subtilisin-like protease SBT1.5 241 384 - -
Glsi03g1462 660 SUPERFAMILY PA domain 275 370 IPR046450 -
Glsi03g1462 660 Pfam Fibronectin type-III domain 561 654 IPR041469 -
Glsi03g1462 660 ProSitePatterns Serine proteases, subtilase family, serine active site. 446 456 IPR023828 -
Glsi03g1462 660 PRINTS Subtilisin serine protease family (S8) signature 445 461 IPR015500 -
Glsi03g1462 660 PRINTS Subtilisin serine protease family (S8) signature 107 120 IPR015500 -
Glsi03g1462 660 CDD Peptidases_S8_3 36 481 IPR034197 -
Glsi03g1462 660 FunFam Subtilisin-like protease SBT1.5 31 282 - -
Glsi03g1462 660 CDD PA_subtilisin_like 248 377 - -
Glsi03g1462 660 Gene3D - 241 385 - -
Glsi03g1462 660 ProSiteProfiles Serine proteases, subtilase domain profile. 1 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1462 Glsi-ChrGlsi03 77072826 77076793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1462 17 654 Subtilisin-like Serine Gene Family AT5G59810 58.125 0.0 741