Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1452 ATGAAACCTAGGGTTAGTGAGAATGAGGACGCAACAATTATAACGTTTGATGAAGGAGATGTGGTCAAGGGAGTGAACGACTGCGAGAGGAGTTTGGTGGGAAAAGTGATCTCTCATAAACCTATTAATTGTGGGGCGTTGGAGATTGTGATGAGTAAGCTTTGGCTGGACAGTGATGGGACGGTGGTAGAGGAAGGTGAATTGCGCTACGCTCTAAGGGGATCAATTCGCGCATTGCCGGAGTTGGTGGGGCAACTGCTTCAGGTGAAGCTTCGAGCATCGGGCATGGAGGATGACATTTCTCCCGCCGGTGATAATGGGGTTACCGACAAGGAACATCAAGCTGCCGGTGTGGGAATTCTTCTTCAGATCATGATGTTGGTTTTATCTTTCGTTCTGGGTCATATCCTTCGTCGCAAGAAGATATACGTCATTCCTGAAGCCAGTGCTTCTCTTCTTATAGGCTTAATTGTTGGTGGACTAGCTAGCATTTCAAACACAGAAAATAGTACTATCAGTTATCTTGGTGGATCAATGTACCTCATTTATAGGCTTCCTTTTGTTGAATGCCTCATGTTCGGTGCTCTTATATCAGCTACTGATCCTGTTACTGTTTTGTCCATATTTCAGGAGCTTGGCACAGATGTCAACCTATATGCCTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCAATTTCCTTGTACAGGTTTCTCAACAGTTCTCTTTATGCAATGTACATGCTTGCAGAAGGTCTTGGCCTCTCTGGTATTGTATCAATACTGTTCACGGGAATAGTCATGAAGCATTACACATTTTCAAATTTGTCAGAAAGTTCTCAAAGATTTTCCTCTTCTTTTTTCGAGTTAATATCATCTTTGGCGGAGACATTTGTGGCAGCAAATGTCTTTTCTTGTGCTTATCTGGTTAACCTGGTCAGACCTGCACATCAAAAGATTCCTCCCAAATATCAGAAAGCACTTTGGTATAGTGGACTTCGGGGGGCAATGGCCTTTGCCCTTGCTTTGCAATCAGTTCATGATCTTCCAGAAGGACATGGCCAGAGCATAGTTACTGCAACTACTGCAATAGTTGTTTTGACGGTATTACTAATTGGCGGTTCAACTAGTTACATGCTGGAAGCTCTGGAAGTGGTAGGTGATATTAATAACATTGATAGCCCACAGAGTTCCATGGGCACTATCACAGAAGCTGACATCTTGTCGGGTGAAATGCAGCAGAATTTTGAAGAAAATAATGGGCATACTACTCCTCACATTGAAGAACCGTCATCAGGGAACAAAATCAAGATGAAGCTGAAAGAATTTCACGAGAGGGCTGCGTCTTTTAAAGCTTTAGATAAAAACTACCTCACCCCTTTCTTTACAAGTCAAAATGGAGAGGGAGAAGATGAAAATGTCTCTGATGGTCATTCTCAAACTTACATGACTCTATCATTTCGTAACTTCTGGAAGTCTTGTCCTGAGGCTTTTGAACTTAAAGCTTCTTTGAAAAGGGAGGGAGGGAAAAGGAGATAA 1542 0.4254 MKPRVSENEDATIITFDEGDVVKGVNDCERSLVGKVISHKPINCGALEIVMSKLWLDSDGTVVEEGELRYALRGSIRALPELVGQLLQVKLRASGMEDDISPAGDNGVTDKEHQAAGVGILLQIMMLVLSFVLGHILRRKKIYVIPEASASLLIGLIVGGLASISNTENSTISYLGGSMYLIYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRFLNSSLYAMYMLAEGLGLSGIVSILFTGIVMKHYTFSNLSESSQRFSSSFFELISSLAETFVAANVFSCAYLVNLVRPAHQKIPPKYQKALWYSGLRGAMAFALALQSVHDLPEGHGQSIVTATTAIVVLTVLLIGGSTSYMLEALEVVGDINNIDSPQSSMGTITEADILSGEMQQNFEENNGHTTPHIEEPSSGNKIKMKLKEFHERAASFKALDKNYLTPFFTSQNGEGEDENVSDGHSQTYMTLSFRNFWKSCPEAFELKASLKREGGKRR 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1452 513 Gene3D - 187 238 - -
Glsi03g1452 513 Pfam Sodium/hydrogen exchanger family 244 382 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Glsi03g1452 513 Pfam Sodium/hydrogen exchanger family 174 242 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Glsi03g1452 513 PANTHER SODIUM/HYDROGEN EXCHANGER 109 164 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1452 Glsi-ChrGlsi03 76992678 77004274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1452 108 463 Antiporters AT3G05030 23.755 4.47e-18 85.5