Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1444 ATGTTTCCGAGACTAATGCTTCCCCATGAAGGGCTAATTGGGAAGGAAGATTTATCGGCTGGTTCGAACCACAATCACAAGGGGGACCCGTGTTTGGTTTTGACCGCCGATCCCAAACCTCGTCTCCGATGGACGCAGGACCTCCATGAACGATTCATCGATGCCGTCACCCAGCTTGGGGGTGCCAGTAAAGCAACACCAAAAGCAATCATGCGGACCATGAATGTTAAGGGTTTGACTCTCTTTCATTTAAAGAGTCATCTTCAGAAATACAGACTTGGTAAGCAATCAGGGAAAGATATGAGTGAAGGATGCAAAGATGACATTGCTGAGGAATTGTTCATAAGGGGTCATGAAATCAAAGAGGCATTAAGATTACAGATGGAAGTGCAAAGTAAACTTCACTTGCAAGTAGAGGCAGAGAAGCACTTGCTCATTCGCCAGGATGCAGAGCGGAGATATATGGCTATGCTTGAAAGAGCTTGCAAGGTGCTGGCTGATCAATTTATTACTGCAACAGTTTTAGCCCCAGACAACCAAAAATTTCAAGCACTTGGAAGCAAAGCACCAAGAGGCTCCTTGCTTGATCCTCTCGGCTTTTACTCCTTACCTTCTGCCGAGACTGCTGGAGGGCATGTCTTAGAAGGAAAAATAGCACCTAGTTTCCAGCCCCATAGGGCTGACTGGAGTGAAGCCAAGATGAGAACTCAAGGCATCAATGTAGCCCAAGGTAACCCTCATGGAATAACTAGGTATGGCATGTAG 765 0.4641 MFPRLMLPHEGLIGKEDLSAGSNHNHKGDPCLVLTADPKPRLRWTQDLHERFIDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMSEGCKDDIAEELFIRGHEIKEALRLQMEVQSKLHLQVEAEKHLLIRQDAERRYMAMLERACKVLADQFITATVLAPDNQKFQALGSKAPRGSLLDPLGFYSLPSAETAGGHVLEGKIAPSFQPHRADWSEAKMRTQGINVAQGNPHGITRYGM 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1444 254 Pfam Myb-like DNA-binding domain 42 92 IPR001005 -
Glsi03g1444 254 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Glsi03g1444 254 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 20 185 IPR044848 GO:0003700
Glsi03g1444 254 FunFam Myb family transcription factor 38 96 - -
Glsi03g1444 254 NCBIfam myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
Glsi03g1444 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 96 IPR017930 -
Glsi03g1444 254 Gene3D - 38 96 - -
Glsi03g1444 254 Pfam MYB-CC type transfactor, LHEQLE motif 119 163 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1444 Glsi-ChrGlsi03 76945764 76949887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1444 25 193 G2-like Transcription Factor Family AT3G24120 48.691 8.05e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi03g1444 Myb_DNA-binding 2.8e-06 CL0123