Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1439 ATGTTCGCCTCTTTCGGCCTGGGAGATGGGTCTGCCTTGAGGCGAATACTATTTTTGGTTCAGGGGAAGGAGAAGAGAAGGGGGAGAAGTTATAACTGCACTAGGCAAGAAAGCAGTAGCTCGGGCATAATCGGTTATCGTCTCGTTGTTGTTCGTATTGGCTCTGTTACTATGTCAAGTGGAATGGGTGAAGGGGTTGATGATAATAAACTGACGCTGTATTCATACTGCGCAAGCTCCTGCTCCTTCCGTGTCCGAATTGCTCTCAACCTCAAAGGGCTCAAATATGAGTACAAACCGATCCACATATTGAAGGGAGACCAATTTGACCCTGAGTTCCTAAAGCTCAATCCTATGGGTTATATTCCCGTTCTCATTCATGGAGAGACAGTAATTTTTGACTCTTTTGCCATCATTATGTATTTGGAGGATAAGTTTCCTCAGCATCCGTTGCTGCCTCATGATATTCATAAAAGAACAATCAATCTCCAGGCTTCCAATATTGTTTCCTCAAGTATACAGCCTTTTCAGAACGTAGGAATACTGAAGTATCTTGAAGAAAAACTTGGTCCTGATGAAAAATTTGTTTGGATCAAAAGTGTTATTAGAAAAGGCTTCACAGCACTTGAAAAACTACTGAAAGACCATGCAGGACGATATGCAACTGGAGATGAAGTTTTCCTGGCAGATTTGTTTATAGCACCTCAAATATATGGAGCAAGGACGAGGTTTGACTTTGACATGAAGGAGTTCCCTCTTCTAGCAAGACTAAATGAGGCATATTACGAGATCCCAGAATTCTGTGAGGCTTTGCCGGAGAACCAGCCAGATCTTCCCTAA 840 0.4262 MFASFGLGDGSALRRILFLVQGKEKRRGRSYNCTRQESSSSGIIGYRLVVVRIGSVTMSSGMGEGVDDNKLTLYSYCASSCSFRVRIALNLKGLKYEYKPIHILKGDQFDPEFLKLNPMGYIPVLIHGETVIFDSFAIIMYLEDKFPQHPLLPHDIHKRTINLQASNIVSSSIQPFQNVGILKYLEEKLGPDEKFVWIKSVIRKGFTALEKLLKDHAGRYATGDEVFLADLFIAPQIYGARTRFDFDMKEFPLLARLNEAYYEIPEFCEALPENQPDLP 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1439 279 NCBIfam maleylacetoacetate isomerase 72 278 IPR005955 GO:0003824|GO:0005737|GO:0009072
Glsi03g1439 279 Pfam Glutathione S-transferase, N-terminal domain 73 149 IPR004045 -
Glsi03g1439 279 FunFam Maleylacetoacetate isomerase 154 279 - -
Glsi03g1439 279 SUPERFAMILY GST C-terminal domain-like 150 278 IPR036282 -
Glsi03g1439 279 CDD GST_N_Zeta 71 143 IPR034333 -
Glsi03g1439 279 FunFam Glutathione S-transferase Z1 69 153 - -
Glsi03g1439 279 CDD GST_C_Zeta 157 275 IPR034330 -
Glsi03g1439 279 Gene3D Glutaredoxin 68 153 - -
Glsi03g1439 279 SFLD Glutathione Transferase (cytosolic) 71 257 IPR040079 -
Glsi03g1439 279 Pfam Glutathione S-transferase, C-terminal domain 195 266 IPR004046 -
Glsi03g1439 279 SFLD Main (cytGST) 71 257 - -
Glsi03g1439 279 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 69 150 IPR004045 -
Glsi03g1439 279 Gene3D - 154 279 - -
Glsi03g1439 279 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 155 279 IPR010987 -
Glsi03g1439 279 SUPERFAMILY Thioredoxin-like 66 153 IPR036249 -
Glsi03g1439 279 PANTHER MALEYLACETOACETATE ISOMERASE 71 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1439 Glsi-ChrGlsi03 76904209 76909323 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1439 70 279 Glutathione S-transferase Gene Family AT2G02380 61.429 1.25e-93 274