LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi03g1439	ATGTTCGCCTCTTTCGGCCTGGGAGATGGGTCTGCCTTGAGGCGAATACTATTTTTGGTTCAGGGGAAGGAGAAGAGAAGGGGGAGAAGTTATAACTGCACTAGGCAAGAAAGCAGTAGCTCGGGCATAATCGGTTATCGTCTCGTTGTTGTTCGTATTGGCTCTGTTACTATGTCAAGTGGAATGGGTGAAGGGGTTGATGATAATAAACTGACGCTGTATTCATACTGCGCAAGCTCCTGCTCCTTCCGTGTCCGAATTGCTCTCAACCTCAAAGGGCTCAAATATGAGTACAAACCGATCCACATATTGAAGGGAGACCAATTTGACCCTGAGTTCCTAAAGCTCAATCCTATGGGTTATATTCCCGTTCTCATTCATGGAGAGACAGTAATTTTTGACTCTTTTGCCATCATTATGTATTTGGAGGATAAGTTTCCTCAGCATCCGTTGCTGCCTCATGATATTCATAAAAGAACAATCAATCTCCAGGCTTCCAATATTGTTTCCTCAAGTATACAGCCTTTTCAGAACGTAGGAATACTGAAGTATCTTGAAGAAAAACTTGGTCCTGATGAAAAATTTGTTTGGATCAAAAGTGTTATTAGAAAAGGCTTCACAGCACTTGAAAAACTACTGAAAGACCATGCAGGACGATATGCAACTGGAGATGAAGTTTTCCTGGCAGATTTGTTTATAGCACCTCAAATATATGGAGCAAGGACGAGGTTTGACTTTGACATGAAGGAGTTCCCTCTTCTAGCAAGACTAAATGAGGCATATTACGAGATCCCAGAATTCTGTGAGGCTTTGCCGGAGAACCAGCCAGATCTTCCCTAA	840	0.4262	MFASFGLGDGSALRRILFLVQGKEKRRGRSYNCTRQESSSSGIIGYRLVVVRIGSVTMSSGMGEGVDDNKLTLYSYCASSCSFRVRIALNLKGLKYEYKPIHILKGDQFDPEFLKLNPMGYIPVLIHGETVIFDSFAIIMYLEDKFPQHPLLPHDIHKRTINLQASNIVSSSIQPFQNVGILKYLEEKLGPDEKFVWIKSVIRKGFTALEKLLKDHAGRYATGDEVFLADLFIAPQIYGARTRFDFDMKEFPLLARLNEAYYEIPEFCEALPENQPDLP	279

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi03g1439	279	NCBIfam	maleylacetoacetate isomerase	72	278	IPR005955	GO:0003824\|GO:0005737\|GO:0009072
	Glsi03g1439	279	Pfam	Glutathione S-transferase, N-terminal domain	73	149	IPR004045	-
	Glsi03g1439	279	FunFam	Maleylacetoacetate isomerase	154	279	-	-
	Glsi03g1439	279	SUPERFAMILY	GST C-terminal domain-like	150	278	IPR036282	-
	Glsi03g1439	279	CDD	GST_N_Zeta	71	143	IPR034333	-
	Glsi03g1439	279	FunFam	Glutathione S-transferase Z1	69	153	-	-
	Glsi03g1439	279	CDD	GST_C_Zeta	157	275	IPR034330	-
	Glsi03g1439	279	Gene3D	Glutaredoxin	68	153	-	-
	Glsi03g1439	279	SFLD	Glutathione Transferase (cytosolic)	71	257	IPR040079	-
	Glsi03g1439	279	Pfam	Glutathione S-transferase, C-terminal domain	195	266	IPR004046	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi03g1439	Glsi-ChrGlsi03	76904209	76909323	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi03g1439	70	279	Glutathione S-transferase Gene Family	AT2G02380	61.429	1.25e-93	274

Showing 1 to 1 of 1 entries