Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1436 ATGGGTGAAAGGATACAGGTATCTCTGCTTCTTGTTTTCAACTATTTCTTGGTTGCAGTGACACAAGCAGCTAATGATGATTTCATAGGCCTAAAGTCTCTTACGGATACCTGGCAGAACCTACCTCCCAGTTGGTCGGGTTCGGATCCTTGTGAAGATGGTTGGGATGGAATCAAGTGCACCGACTCTCGTGTTATTTCCATAAACTTATCAAGCAAGGATTTGACGGGCCAGCTATCTGGAGATATTGCTTTACTATCTGAATTAGATACATTGGATCTCTCTTACAATAAGGGCTTAACAGGTTCACTTCCACCAGAAATTGTAAAATTGAAGAAGCTGTCCAACTTGGTTCTCGTTGGTTGTGGTTTCACTGGTCCTATTCCAGAGGATATAGGATCTCTACAGCAGCTTGTCGTCTTATCTTTAAACTCCAATAGCTTTACTGGACAAATTCCGCCTTCAATTGGGAATCTATCAAAACTTTTTTGGCTAGATTTAACAGAAAATCACCTTGAAGGACCCCTCCCAGTATCAGGCGGCAGTACACCTGGCCTTGATAAGCTATACAATGCAAAGCACTTTCATCTTGGGAATAACATGCTTTCAGGCACAATTCCTCCTCAACTTTTTAGCTCAGAAATGACTCTTATACATGTGCTTCTTGACAGGAATCAACTTACTGGCAGCATTCCTCGGACACTTGGACTTGTACAGAGTCTGGAGGTGGTGAGCTTTTATGATAATTTGTTAAGTGGATCTGTGCCTCAAAACATCAACAATCTTACGAACATTCAGGAGCTGTACTTGTCCAACAATAAGCAGTCAGGTCCACTGCCAAACCTGAGTGGAATGAACAACCTCACACACCTTGATATGAGCAACAATAGCTTTGATCCATCGGATTTTCCACCATGGCTTTCAACTCTACGAAGTTTGACAACATTAAAGATGGAGAACACACAACTTCAAGGGCAAATTCCTGTTTCTTTGTTTAACCTAGCCAATTTACAGACAGTGGTGCTAAACCTCAATAAACTCAATGGTACCTTGGACATTGGAACCGCCTACAGCAAACAACTGCGCCGAATTGAATTGCAAAATAATCAAATTGACAACTTTGAGCAACATGACAGAGTGACCCACATCAGGATAATACTTGTGCATAATCCGATTTGTTATGAAACGGGACAAGCTGAAAGTTACTGCTCCAATTGGCTGCCAACCAATACAACATATACAGCACCCCCAAGTCTCTGTCTGTCTGTTACCTGCAGTTCAGATCAGATTCTCAGCCCCAACTGCATATGTGCATATCCCTACATGGGAACTTTAACTTTTAGAACACCTTCAATTATGGACGGGGGACAAAATGCAGGCCTTGAGCAATTTCTTATGAAAGAGTTTAAGAACAATCATCTACCTGTGGATTCAATTTCTTTGAGCAATCTGACCCAGAACCGATTTGGGGATCCTGAATTGAGCTTACAAGTCTTCCCATCAGGCCAAGATCATTTCAATCGAACAGGGATTTCTAGTATATTCTCTCTGCTAAGCAACCTGACCCTTCATCCATTTTATTTCAAGGCCTATATCTATAGACACTCTGAAGAATCTATGGAATCAAGTAAATCATCGAGTATTGCCTTCATAACTGGAGTAGCAGTTGGTGGTTCTGTTGTGCTAGTGTTACTACTTCTTGCAGGAGTTTATGCTTTCCACCAAAAGAAAAGGGCAGAAAAAGCAATTGGTCAAAGCAATCCATTTGGACACTGGGTTTCAAATGACAGCAAAAGTATGAACCCTCAGTTGAAAGGAACAAGGCAGTTCTCTTTTGTAGAGGTTCAGAAATACACCAGAAATTTTTCACAAGCCAATGATCTAGGTTCTGGGGGTTTTGGAAAGGTTTATAGGGGGACTCTTCCCAATGGGCAACTGATAGCCATAAAAAGAGCTCAAAGAGAATCTAAGCAGAAAGGGCTTGAGTTTAAAGCTGAGGTTGAACTCCTATCAAGGGTCCACCATAAGAATCTTGTAAGTCTCGTAGGGTTCTGCTTTGAGCGAGGAGAACAAATGCTGGTTTATGAGTATGTCCCAAATGGAACTCTACGGGATACTATCTCAGGGAAATCAGGAATTAGGTTGGATTGGATTAGGAGGCTAAAGGTAGCCCTTGGTGCTGCTAGGGGTTTGGCTTATCTTCATGAACATGCCAATCCTCCTATCATACATAGGGACATCAAATCAAACAATATTTTGCTGGATGAGCACTTGAATGCCAAAGTTGCTGATTTTGGTCTTTCCAAGCCAATGGTTAATTGTGAAAAAGATCATGTTACTACTCAAGTTAAAGGAACAATGGGCTACTTGGATCCAGAGTATTATACCAGTGAGCAACTGACTGAGAAGAGTGATGTTTATAGCTTTGGAGTGTTAATGTTGGAGCTGATAACTGCAAGAAAGCCAATAGAACAGGGGAAATACATTGTGAAAGTGGTGAGGAACTCAATTGATAAGACAAAAGACTTGTACGGTCTTCATGAAATTCTTGATCCAGCCATTGGTTTAGGGTCAACAGTGAAGGGTTTAGAGCAATTTGTGGATCTCTCAATGAAGTGTCTTGAAGAATCGGGTGCTGACAGGCCTAGAATGAATGATGTGGTAAAAGAAATTGAAAACTTGTTGCAGTTAGCTGGTTTGAACGCCACTGCTGAATCAGTAGCATCTACTTCATCTAGTCATGATGAGATAACTACAGGGACTTCTCAGTATCTTCATAGTAACGAGTCCTTTGATTTAAGTGTGGTCCCTCTACAACCACAAATTGAGCCTTAA 2835 0.4134 MGERIQVSLLLVFNYFLVAVTQAANDDFIGLKSLTDTWQNLPPSWSGSDPCEDGWDGIKCTDSRVISINLSSKDLTGQLSGDIALLSELDTLDLSYNKGLTGSLPPEIVKLKKLSNLVLVGCGFTGPIPEDIGSLQQLVVLSLNSNSFTGQIPPSIGNLSKLFWLDLTENHLEGPLPVSGGSTPGLDKLYNAKHFHLGNNMLSGTIPPQLFSSEMTLIHVLLDRNQLTGSIPRTLGLVQSLEVVSFYDNLLSGSVPQNINNLTNIQELYLSNNKQSGPLPNLSGMNNLTHLDMSNNSFDPSDFPPWLSTLRSLTTLKMENTQLQGQIPVSLFNLANLQTVVLNLNKLNGTLDIGTAYSKQLRRIELQNNQIDNFEQHDRVTHIRIILVHNPICYETGQAESYCSNWLPTNTTYTAPPSLCLSVTCSSDQILSPNCICAYPYMGTLTFRTPSIMDGGQNAGLEQFLMKEFKNNHLPVDSISLSNLTQNRFGDPELSLQVFPSGQDHFNRTGISSIFSLLSNLTLHPFYFKAYIYRHSEESMESSKSSSIAFITGVAVGGSVVLVLLLLAGVYAFHQKKRAEKAIGQSNPFGHWVSNDSKSMNPQLKGTRQFSFVEVQKYTRNFSQANDLGSGGFGKVYRGTLPNGQLIAIKRAQRESKQKGLEFKAEVELLSRVHHKNLVSLVGFCFERGEQMLVYEYVPNGTLRDTISGKSGIRLDWIRRLKVALGAARGLAYLHEHANPPIIHRDIKSNNILLDEHLNAKVADFGLSKPMVNCEKDHVTTQVKGTMGYLDPEYYTSEQLTEKSDVYSFGVLMLELITARKPIEQGKYIVKVVRNSIDKTKDLYGLHEILDPAIGLGSTVKGLEQFVDLSMKCLEESGADRPRMNDVVKEIENLLQLAGLNATAESVASTSSSHDEITTGTSQYLHSNESFDLSVVPLQPQIEP 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1436 944 SUPERFAMILY Protein kinase-like (PK-like) 608 907 IPR011009 -
Glsi03g1436 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
Glsi03g1436 944 PANTHER RECEPTOR-LIKE PROTEIN 55 33 893 - -
Glsi03g1436 944 SUPERFAMILY L domain-like 44 413 - -
Glsi03g1436 944 FunFam Leucine-rich repeat protein kinase family protein 182 281 - -
Glsi03g1436 944 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 698 907 - -
Glsi03g1436 944 CDD STKc_IRAK 628 894 - -
Glsi03g1436 944 Gene3D Ribonuclease Inhibitor 25 180 IPR032675 -
Glsi03g1436 944 Gene3D Ribonuclease Inhibitor 181 279 IPR032675 -
Glsi03g1436 944 SMART serkin_6 622 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1436 944 FunFam Leucine-rich repeat receptor-like protein kinase 596 697 - -
Glsi03g1436 944 ProSitePatterns Protein kinases ATP-binding region signature. 628 650 IPR017441 GO:0005524
Glsi03g1436 944 Gene3D Ribonuclease Inhibitor 280 438 IPR032675 -
Glsi03g1436 944 Gene3D Transferase(Phosphotransferase) domain 1 698 913 - -
Glsi03g1436 944 ProSiteProfiles Protein kinase domain profile. 622 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1436 944 Gene3D Phosphorylase Kinase; domain 1 593 697 - -
Glsi03g1436 944 FunFam Leucine-rich repeat family protein 26 181 - -
Glsi03g1436 944 Pfam Protein tyrosine and serine/threonine kinase 625 890 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1436 Glsi-ChrGlsi03 76879258 76887744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1436 1 941 Receptor kinase-like Gene Family AT5G49760 52.758 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Glsi03g1436 PK_Tyr_Ser-Thr 1.8e-47 CL0016