Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1435 ATGGATTTGAAAGGCCAGCTTCCCGGAGATATTGGATTACTCTCTGAATTACAGATTTTGGATCTCTCTTTCAATAAGAACATAGTCGGACCACTTCCCCCAGAAATTGGAAATTTGAAGAAGCTATCGGATTTAAGTCTTAATGGTTGTGGTTTCACTGGGCTTATTCCAGATGAAATTGGATCGTTACAAGAGCTCGCCTATTTAGCTTTAAACTCCAACAGCTTCATAGGACGAATTCCGCCTTCTATTGGCAAATTATCAAAACTTGAATGGCTGGATTTAACTTATAATCAGCTTGATGGACCCATCCCAGTATCTAGTGGCACTACTCCTGGTTTAGACATGCTACTCAAGACAAAGCACTTTCATCTTGGGAATAATAAGCTTTCTGGGGAAATTCCTTCCAAACTTTTCTGCCCGGAAATGGCTCTGATACATTTGATTTTGAATGGCAATCAACTTACTGGAAATATTCCTTATACACTTGGACTTGTTCAGAATTTGGAGGTGGTGCGCTTAGAAAACAACTCATTAAGTGGTACTGTGCCTCAGAACCTGAGGAATCTTCTGAATGTTACAGACCTGATCTTGTCCAACAACAAGTTGCAAGGTCCCTTACCAAACCTTAGTGGAATGAATCACAGCCTCACGTACTTAATGATGGAGCGCACACAACTTCAAGGGCAGATTCCTTTTCCATTCTTTAGCCTTGCCAACTTGCAGACTGTGGTGCTGAAAAACAACAAACTTAATGGAACCTTGGATATTGGCACCACCTACAGCAAACAACTGCAACTTATTGATTTGCAGAATAATGCAATTGACTATTTTAAACAACAAGGTGAAGACACCAGTGTCACGATAATACTTTTGCACAACACGGTTTGTTATGAAACAGGCACTTCCTGCTCCATTCCCGATATGTCATATGCAAACCCACCCAAGAACTGTCCGCCTGCTACATGCAATATTCCATATCAGATTCTTAGCCCCAAATGCAAATGCAGTATTCCATTTACAGGAACTTTATCTTTCAGAGCTCCTTCCTACATGGACTGGAGAAACAAATCTCCCCTCGAGGAAGATCTACTGAAAAATTTTCAATCCTCTCATCTACCCGTGGACTCAGTATCTGTGAGTAATCCACCTTACTATACATTTCAGGATCTTGAATTTATCATACAAATCTTCCCATCAGGCAAAGATGGATTCAATCGAACAGAAATTTCTAGTATAAGCTTGCTGCTAAACAAGATGAGTAGAAATCAAGCATATACTTTTCTTCCTGATCCTGATAATTATGAAGTACTTCAAAGGTCGAGTAAATCATCAAACATTCACATCATAATTGGAGCAGCTGTTGGTGGTTTTGTCCTGCTTGTGCTTTTACTCCTTGCAGGTGTTTATGGTTTCTGCCAAAGGAAAAGGGCAGAAAGAGCAATTGGACAAAGCAATCCATTTGGACACTGGGATCTGAAGGATAACAATAGTCCAAAACCTCAGTTACACGGAGCAAGGCATTTCTCTTTTGAAGAACTTAAGAAATACACCAACAATTTCTCGCAAGACAATGATATTGGGTCCGGGGGTTACGGGAAGGTTTATCGGGGAACTCTTCCCAAGGGGCAACTGATCGCCATAAAACGAGCCCAAAAACGATCAGAGCAGAGGGGCCTTCAATTCAAAGCTGAGATTGAACTCCTATCAAGGGTCCACCATAAGAATCTGGTTAGCCTTGTGGGATTCTGCTTTGAGCGAGGAGAACAAATGCTGGTTTACGAATTTATTCCAAATGGATCTCTAAAGGATTCTCTCTCAGGGAAGTCAGGAATTATATTGGACTGGACTAGAAGGCTAAAAGTAGCCCTTGGTTCTGCCAGGGGTTTGGCTTATCTTCATGAGCATGCCAGTCCTCCTATTATACATAGGGACATTAAATCAAACAACATTTTGCTGGATGCACATTTGAATGCAAAAGTTGCTGATTTTGGTCTTTCCAAGCCTATGGATGATTGTGAAAAAGATCACGTTACTACTCAAGTTAAAGGGACAATGGGCTACTTGGATCCAGATTATTACACGAGCCAACAATTGACTGAGAAAAGTGATGTTTACAGCTTTGGAGTGTTAATGTTGGAGCTGATAACTGCAAGAAAACCAATAGAAAAAGGGAAACATATTGTGAAGGTGGTTAGGAATGCAGTTGATAAGACAAAAGACTTGTATGGTCTTCTTGAAATTCTTGATCCAGCTATTGGTTCAAGGACGACATTGATGGGTTTTGAGAAGTTTTTGGATCTTGCAATGAAGTGTGTTGAAGACTCAGGTGCTGACCGACCTACAATGAATGATGTGGTGAAAGAAATAGAAAGCATATTGCAGTCAGCTGGTTTGAACCCCACAGCCGAATCATCAGCATCCAATTCAGCTACTCATGAGGAGATATGTTGTGTGAAATCCCAGGATCTTTATAGCAATTAG 2484 0.4074 MDLKGQLPGDIGLLSELQILDLSFNKNIVGPLPPEIGNLKKLSDLSLNGCGFTGLIPDEIGSLQELAYLALNSNSFIGRIPPSIGKLSKLEWLDLTYNQLDGPIPVSSGTTPGLDMLLKTKHFHLGNNKLSGEIPSKLFCPEMALIHLILNGNQLTGNIPYTLGLVQNLEVVRLENNSLSGTVPQNLRNLLNVTDLILSNNKLQGPLPNLSGMNHSLTYLMMERTQLQGQIPFPFFSLANLQTVVLKNNKLNGTLDIGTTYSKQLQLIDLQNNAIDYFKQQGEDTSVTIILLHNTVCYETGTSCSIPDMSYANPPKNCPPATCNIPYQILSPKCKCSIPFTGTLSFRAPSYMDWRNKSPLEEDLLKNFQSSHLPVDSVSVSNPPYYTFQDLEFIIQIFPSGKDGFNRTEISSISLLLNKMSRNQAYTFLPDPDNYEVLQRSSKSSNIHIIIGAAVGGFVLLVLLLLAGVYGFCQRKRAERAIGQSNPFGHWDLKDNNSPKPQLHGARHFSFEELKKYTNNFSQDNDIGSGGYGKVYRGTLPKGQLIAIKRAQKRSEQRGLQFKAEIELLSRVHHKNLVSLVGFCFERGEQMLVYEFIPNGSLKDSLSGKSGIILDWTRRLKVALGSARGLAYLHEHASPPIIHRDIKSNNILLDAHLNAKVADFGLSKPMDDCEKDHVTTQVKGTMGYLDPDYYTSQQLTEKSDVYSFGVLMLELITARKPIEKGKHIVKVVRNAVDKTKDLYGLLEILDPAIGSRTTLMGFEKFLDLAMKCVEDSGADRPTMNDVVKEIESILQSAGLNPTAESSASNSATHEEICCVKSQDLYSN 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1435 827 CDD STKc_IRAK 527 793 - -
Glsi03g1435 827 FunFam Leucine-rich repeat protein kinase family protein 110 209 - -
Glsi03g1435 827 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Glsi03g1435 827 Gene3D Ribonuclease Inhibitor 1 109 IPR032675 -
Glsi03g1435 827 ProSiteProfiles Protein kinase domain profile. 521 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1435 827 Gene3D Phosphorylase Kinase; domain 1 491 596 - -
Glsi03g1435 827 PANTHER RECEPTOR-LIKE PROTEIN 55 19 793 - -
Glsi03g1435 827 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 2 104 - -
Glsi03g1435 827 SUPERFAMILY L domain-like 5 299 - -
Glsi03g1435 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Glsi03g1435 827 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 597 807 - -
Glsi03g1435 827 FunFam Leucine-rich repeat protein kinase family protein 490 596 - -
Glsi03g1435 827 Pfam Protein kinase domain 522 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1435 827 SMART serkin_6 521 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1435 827 SUPERFAMILY Protein kinase-like (PK-like) 495 789 IPR011009 -
Glsi03g1435 827 Gene3D Ribonuclease Inhibitor 110 327 IPR032675 -
Glsi03g1435 827 Gene3D Transferase(Phosphotransferase) domain 1 597 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1435 Glsi-ChrGlsi03 76853420 76859941 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1435 1 815 Receptor kinase-like Gene Family AT5G49760 54.249 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Glsi03g1435 Pkinase 4e-47 CL0016