Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1434 ATGCTAATGCTGACTGACCCAGAGGCCGATGAAGACGAAGACGAAGAGTCATCATCAACAACACTTGGACGCCCTTTTTTTCATGCTGAGCTTACGAATTTTCCCGTTACCAAAATTACATTGCGTGAAGCTGTTCTGTCCAAGTTGTCAACTCAGATGAGTGAAAGAATACTAGTATTCCTGCTGCTTGCTTTCAATTTTTTGTTGGTTGCAGTAGCAGACACAGCTGATGAGGACCGGACCGCGCTAAAGTCTCTCATGGATAACTGGAAGAACACACCTCCCACTTGGAAGGGTTCAGATCCTTGTGATAATTGGGAAGGAATTAAGTGCACCAATTTACATGTTACATCCATAACGTTAGCAAGCACAGATTTGATAGGCCAACTTTCTGGAGATATTGGATCACTATCTAATTTAGAGATCTTGGATCTGTCATACAATAAGGACTTAGCAGGATCGCTTCCACCAACCATTGGAAATTTGAAGAAGCTTTCAACCTTAATTCTTCTTGGTTGTAGTTTCAATGGTCCTATTCCAGATGAAATAGGATATCTTCAGGAGCTCCGCTACTTATCTTTAAATTCCAATAACTTTGTTGGAAAAATTCCACATGCTATTGGTAATCTATCAAAACTTTATTGGCTAGATTTAGCTGATAATCAGCTTGATGGACCCATCCCAGTATCTAGCGGCAGTACCCCTGGTCTTGATCAGCTACACCACACGAGGCATTTTCATTTTGGGAACAATAAGCTCTCAGGCCCTGTTCCTCCTCAACTTTTTAGCTCGGACATGATTCTGCTTCATGTGCTTTTTGAAAACAATCAACTTAACGGCAGCATTCCGTCTACACTTGGACTTGTTCATACTCTGGAAGTGGTGCGCTTTGATAATAATGTTTTAAGTGGACCTGTGCCTCAGAACATCAGCAACCTTACGGAAGTTCAAGAACTGTACTTGTCCAACAATGAGCTTTCAGGTTCCCTGCCAAGCCTTGCTGGAATGGATGTCCTCAGATACCTGGATATGAGCAACAATAGCTTTAGTCCATCGGATTTCCCACAATGGGTTTTGACTCTACAGTCTCTTACAACACTAAAGATGGAGAACACAGAACTTCAAGGACAGATTCCTGTTTCTTTGTTTAGCCTTGGCAATTTACAGACTGTGGATCTAAAACGCAATAAACTAAATGGAACCTTGGATATTGGCACTACCCACAGCCCCCAGCTGCGACTTATTGACTTGCAGACTAATACAATTGACGACTTTAAGCAAAAGAAAGAAGGAGTCTCCAATGTCAAGATCATACTTAAAGATAACCTAGTTTGCGCAGAATCAGGAGAGACCAGGGATTACTGCTCCGATCCCCAACCCAATGATGTGTCATATACAACACCATTGAATAACTGTGGGCCTGGTACCTGCAGTTCAGAACAAATTCGTAGCCCCAAATGCAAATGTGCACATCCATATGAAGGAACTTTAACTTTCAGAGCACCTTCCTTCTCGGACTTGGGAAACACAACTTACTATCGTTCCCTTGAGGAAAAACTTATGAATTCTTTTGAATCTAATGATCTACCAGTGGATTCAGTTTCTCTGAGCGATCCAACCACGGACTCACATCAGTATCTTGATTTGAGATTACGAGTCTTCCCATTAAACCAAGATAATTTCAACCGAACAGGGATTATTAGCATTGGCTTTCTGCTAAGTAACCAGACTTTTAAGCCTCCTTCAACTTTTGGACCATTTTTTTTTGTTGCAGATAAATATGAAACCTTTGCAAACTATGGGTCAAGCAAATCAGTAAGCATTGGCGTCATAATTGGAGCAGCAGTTGGTGGTTCCGTCCTGGTTGTGTTATTACTCCTTGCAGGTCTTTACGCTGTCTTCCAAAAGAAAAGAGCAGAAAAAGCAATCGACCACACCAATCCTTTCAGACGCTGGAATACAAGTGGGAGCGATAGTGCTCTCCCTCAGTTAAAAGGAGGAAGGCAGTTCTCTTTCGAAGAGCTCAAAAAATACACCACAAATTTTTCTGAAGCTAACTCTATTGGATCTGGTGGTTATGGCAAGGTTTATAGGGGGACTCTCCCCAATGGACAACTGATAGCTATAAAACGAGCTCAAACGGAATCAAGGCAGGGGGCAAACGAATTTAAAGCTGAGATTGAACTCCTATCAAGGGTCCACCATAAGAATCTTGTTAGCCTTATAGGATTCTGCTTTGAGAGAGGAGAACAAATGCTGGTCTATGAGTATGTTCCAAATGGAACTTTAAAGGATACTATCTCAGGGAGATCGGGAATTACATTGGATTGGATTAGAAGGCTAAAAGTTTCCCTTGGTGCTGCAAGGGGTTTGGCTTATCTTCATGAACTTGCCAACCCTCCTATCATACACAGAGACGTCAAATCAAACAATATTTTGTTAGATGAGCGCTTGAATGCAAAGGTTTCTGATTTTGGTCTCTCCAAGAGTTTGGTTGATTGTGAAAAAGATCATATTACCACACAAGTTAAAGGAACAATGGGCTACTTGGACCCAGAGTATTATATGTCTCAACAGTTGACCGAGAAGAGTGATGTTTATAGCTTTGGAGTGCTAATGTTGGAGACGGTAACTGCAAGAAAGCCAATAGAACGAGGGAAATACATTGTGAAAGAGGTTAAGAAGTCAATTGACAAGACAAAAGGCTTATATGGTCTTCATGAATTGATTGACCCAACCATTGGCTTGGGTTCAACACTCAGTGGTTTTGATAAGTTCATAGACCTTGCAATGAAGTGTGTTGAGGAATCAGGTGCTGACAGGCCTACAATGAGTGATGTGGTAAAAGAAATTGAAAGCATTCTGCAGTTAGCTGGTTTAAACCCCGCAGCAGACTCGGCGTCCACTTCTGCTAGTTATGAGGAGGTAAGCAAAGGGAGTTCCCGCCACCCTTACAGTAATGACTCCTTTGATTTAGGTGCGGTGCTTCCACATCTAAAAGTTGAGCCAAAGTGA 3015 0.4186 MLMLTDPEADEDEDEESSSTTLGRPFFHAELTNFPVTKITLREAVLSKLSTQMSERILVFLLLAFNFLLVAVADTADEDRTALKSLMDNWKNTPPTWKGSDPCDNWEGIKCTNLHVTSITLASTDLIGQLSGDIGSLSNLEILDLSYNKDLAGSLPPTIGNLKKLSTLILLGCSFNGPIPDEIGYLQELRYLSLNSNNFVGKIPHAIGNLSKLYWLDLADNQLDGPIPVSSGSTPGLDQLHHTRHFHFGNNKLSGPVPPQLFSSDMILLHVLFENNQLNGSIPSTLGLVHTLEVVRFDNNVLSGPVPQNISNLTEVQELYLSNNELSGSLPSLAGMDVLRYLDMSNNSFSPSDFPQWVLTLQSLTTLKMENTELQGQIPVSLFSLGNLQTVDLKRNKLNGTLDIGTTHSPQLRLIDLQTNTIDDFKQKKEGVSNVKIILKDNLVCAESGETRDYCSDPQPNDVSYTTPLNNCGPGTCSSEQIRSPKCKCAHPYEGTLTFRAPSFSDLGNTTYYRSLEEKLMNSFESNDLPVDSVSLSDPTTDSHQYLDLRLRVFPLNQDNFNRTGIISIGFLLSNQTFKPPSTFGPFFFVADKYETFANYGSSKSVSIGVIIGAAVGGSVLVVLLLLAGLYAVFQKKRAEKAIDHTNPFRRWNTSGSDSALPQLKGGRQFSFEELKKYTTNFSEANSIGSGGYGKVYRGTLPNGQLIAIKRAQTESRQGANEFKAEIELLSRVHHKNLVSLIGFCFERGEQMLVYEYVPNGTLKDTISGRSGITLDWIRRLKVSLGAARGLAYLHELANPPIIHRDVKSNNILLDERLNAKVSDFGLSKSLVDCEKDHITTQVKGTMGYLDPEYYMSQQLTEKSDVYSFGVLMLETVTARKPIERGKYIVKEVKKSIDKTKGLYGLHELIDPTIGLGSTLSGFDKFIDLAMKCVEESGADRPTMSDVVKEIESILQLAGLNPAADSASTSASYEEVSKGSSRHPYSNDSFDLGAVLPHLKVEPK 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1434 1004 FunFam Leucine-rich repeat protein kinase family protein 233 332 - -
Glsi03g1434 1004 MobiDBLite consensus disorder prediction 968 990 - -
Glsi03g1434 1004 SUPERFAMILY Protein kinase-like (PK-like) 668 970 IPR011009 -
Glsi03g1434 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672|GO:0006468
Glsi03g1434 1004 FunFam Leucine-rich repeat protein kinase family protein 648 757 - -
Glsi03g1434 1004 Gene3D Ribonuclease Inhibitor 76 231 IPR032675 -
Glsi03g1434 1004 Gene3D Ribonuclease Inhibitor 232 334 IPR032675 -
Glsi03g1434 1004 ProSiteProfiles Protein kinase domain profile. 682 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1434 1004 PANTHER RECEPTOR-LIKE PROTEIN 55 84 954 - -
Glsi03g1434 1004 ProSitePatterns Protein kinases ATP-binding region signature. 688 710 IPR017441 GO:0005524
Glsi03g1434 1004 MobiDBLite consensus disorder prediction 968 987 - -
Glsi03g1434 1004 FunFam Leucine-rich repeat family protein 78 232 - -
Glsi03g1434 1004 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 758 967 - -
Glsi03g1434 1004 SUPERFAMILY L domain-like 102 426 - -
Glsi03g1434 1004 Gene3D Transferase(Phosphotransferase) domain 1 758 970 - -
Glsi03g1434 1004 Gene3D Phosphorylase Kinase; domain 1 654 757 - -
Glsi03g1434 1004 Gene3D Ribonuclease Inhibitor 335 436 IPR032675 -
Glsi03g1434 1004 CDD STKc_IRAK 688 954 - -
Glsi03g1434 1004 SMART serkin_6 682 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1434 1004 MobiDBLite consensus disorder prediction 1 17 - -
Glsi03g1434 1004 MobiDBLite consensus disorder prediction 1 22 - -
Glsi03g1434 1004 Pfam Protein kinase domain 683 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1434 Glsi-ChrGlsi03 76842047 76852115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1434 45 956 Receptor kinase-like Gene Family AT1G79620 53.814 0.0 994
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Glsi03g1434 Pkinase 9.7e-47 CL0016