Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1411 ATGTCTGAAGACGCGGGCCCAATGTTGGTGGTTTATGATGATCCCTCAGACCAACGATCACTGTCTTTGGATGATACAAGCAGCACAGAGGAATCACCAGATGAAACCAGGCTCTCGTTGGAAACTAGTAATGATGCAATTCCATATATTGGGCAAAGATTTACCACTCATGATGCTGCTTATGAATTTTATAGTGAATTTGCCAAGCGGTGTGGATTTTCAATTCGGCGTCACCGTACAGAGGGAAAAGATGGTGTTGGAAAGGGACTTACTAGACGCTACTTTGTTTGTCATCGTGCTGGTAACACCCCTGTCAAAACATCAACTGAAAGTAAACCTCAAAGAAATCGAAAATCTTCTCGATGTGGATGCCAGGCTTATATGCGTATAAGCAAGACAACAGAATTAGGTGCACCAGAATGGCGTGTTACTGGTTTTGCTAACCATCATAATCATGAACTTTTAGAACCAAACCAAGTTCGGTTCCTTCCCGCATACAGAACTATTTCAGATTCAGACAAAAGCCGAATCCTGATGTATGCTAAAACAGGGATTTCTGTCCATCAAATGATGCGGCTTATGGAGCTTGAGAAGTGTGTGGAACCTGGATATCTGCCTTTTACTGAAAAGGATGTGAGGAATTTACTTCAGTCATTTAGGAAATTAGATCCAGAAGAAGAAAGCATCGATTTATTAAGAATGTGCAGAAATATTAAGGAGAAAGACTCTAATTTCAAATTTGAGTTCACACTTGATACAAACAACTGTTTGGAGAATATAGCCTGGTCATATGCCTCATCAATACAGTCGTATGATATCTTCGGTGATGTAGTGGTATTTGATACAACACACCGCCTGACTGCATTTGACATGCCATTGGGGATATGGGTTGGGATGAATAATTATGGAATGCCTTGCTTTTTTGGCTGTGTGCTTCTACGAGAAGAAAACTTGAAGTCATATTCATGGGCATTGAAGGCATTCTTAGGGTTTATGAATGGGAAGGCTCCACAGACAATATTAACTGACCAAAACATGTGTCTCAAAGAGGCATTAACCATGGAAATGCCGACAACCAAACATGCGCTCTGCATATGGATGATTGTGGCAAAGTTTCCATCTTGGTTTAGTGCTGTTCTAGGTGAACGTTACAATGAATGGAAGGCTGAATTTTATAGACTTTATAATCTTGAGTCAGTTGAGGATTTTGAACTGGGTTGGAGGGATATGGTCAGTTCGTTTGGGCTGCATGCCAGCAGGCACATAGCTAATTTGTATAGCTTACGCTCGCTGTGGGCATTGCCATTTTTGAGAAGCCATTTTCTTGCGGGAATGACTACAACTGGTCAGTCAAAGTCAATTAATGCTTTCATTCAACGGTTTCTGAGTGCACAGACTCGGCTTGCACACTTTGTAGAACAGGTAGCTGTTGCTGTGGATTTCAAAGATCAAACTGGAGAACAACAAACAATGCAACAGAATCTCCAAAATATTTGTCTCAAAACTGGAGCTCCCATGGAGTCACATGCTGCCACAATTCTCACTCCTTTTGCCTTTTCAAAGCTTCAAGAACAACTTGTGTTGGCTGCACATTATGCATCTTTTCCATTCGAAGATGGTTTCCTTGTGAGGCACCATACAAAAGCTGAGGGAGGTCGGAAAGTGTATTGGGCCCCTCGAGAAGGAATTATAAGTTGCAGTTGCCACCAGTTTGAGTTCTCTGGAATTCTCTGTCGGCATGCTCTTCGAGTTCTTTCAACAGGAAATTGCTTTCAGATACCAGATAGATATCTTCCCTCTCGTTGGCGTCGAATCAGCATGACCTCTGCTAAGCTTCTTCAGAGTACACCAAATGATCATTCTGAAAGAGTACAGTTATTACAAAATATGGTTTCTTCTCTTATCACAGAATCTGCCAAGTCAAAGGAAAGATTAGATATTGCAACAGAACAAGTTTCCATCCTTTTGTCTCGAATAAGGGAGCAACCAGTTTCATTACAAGGTGTCAGAGATATGTCTGGCATTGGTAGGAATGTTTGA 2040 0.4142 MSEDAGPMLVVYDDPSDQRSLSLDDTSSTEESPDETRLSLETSNDAIPYIGQRFTTHDAAYEFYSEFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPVKTSTESKPQRNRKSSRCGCQAYMRISKTTELGAPEWRVTGFANHHNHELLEPNQVRFLPAYRTISDSDKSRILMYAKTGISVHQMMRLMELEKCVEPGYLPFTEKDVRNLLQSFRKLDPEEESIDLLRMCRNIKEKDSNFKFEFTLDTNNCLENIAWSYASSIQSYDIFGDVVVFDTTHRLTAFDMPLGIWVGMNNYGMPCFFGCVLLREENLKSYSWALKAFLGFMNGKAPQTILTDQNMCLKEALTMEMPTTKHALCIWMIVAKFPSWFSAVLGERYNEWKAEFYRLYNLESVEDFELGWRDMVSSFGLHASRHIANLYSLRSLWALPFLRSHFLAGMTTTGQSKSINAFIQRFLSAQTRLAHFVEQVAVAVDFKDQTGEQQTMQQNLQNICLKTGAPMESHAATILTPFAFSKLQEQLVLAAHYASFPFEDGFLVRHHTKAEGGRKVYWAPREGIISCSCHQFEFSGILCRHALRVLSTGNCFQIPDRYLPSRWRRISMTSAKLLQSTPNDHSERVQLLQNMVSSLITESAKSKERLDIATEQVSILLSRIREQPVSLQGVRDMSGIGRNV 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1411 679 MobiDBLite consensus disorder prediction 1 43 - -
Glsi03g1411 679 Pfam MULE transposase domain 277 370 IPR018289 -
Glsi03g1411 679 Pfam SWIM zinc finger 560 587 IPR007527 GO:0008270
Glsi03g1411 679 ProSiteProfiles Zinc finger SWIM-type profile. 553 589 IPR007527 GO:0008270
Glsi03g1411 679 SMART 26again6 564 591 IPR006564 GO:0008270
Glsi03g1411 679 Pfam FAR1 DNA-binding domain 62 155 IPR004330 -
Glsi03g1411 679 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 41 654 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1411 Glsi-ChrGlsi03 76466043 76468782 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Glsi03g1411 MULE 7.7e-19 CL0219