Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1403 ATGTCTTCCAGCTCAATGTCATCCTCTGGCTCATGGACTGCTAAGGACAAAAGTGCCTTTGAAAGGGCTCTTGCTGTTTATGACAAGGAAACCCCTGATCGTTGGTGCATTATTGCCAAGGCTGTTGGTGGCAAAACTGTAAAGGAAGTGAAGAGGCACTATGAGCTCCATGCGCAGGACACTGAGCATATTGAGTCAAGACAAGTGCCCTTCCCAAGTTACACGAGAAGTGGAGGCTCTGACAAGGAAAAAAGAGAACATGTTGCAAGAGGCAAAGATGAATTTGCATCACAAATTAGACAGCCAAAGCGTCAACAATGGCGAGGGCTTAGGGAGAATCTAAATCACGACTTCTTGAGGCTCTTGAGGATAAGGGATTTTTTGAGCCTCATTTTAACATATCCCATGACAATGCCTGAACAACACTTGCTAAGGAAATGGATAGATGATTGTCAAGCGCTAACTTCCAAATACTCTGAACACATATATTCTAAATCATATCGTTGGATGCATCTGCTTTCTGAAAAGCCACTGACATATTTGTAA 546 0.4304 MSSSSMSSSGSWTAKDKSAFERALAVYDKETPDRWCIIAKAVGGKTVKEVKRHYELHAQDTEHIESRQVPFPSYTRSGGSDKEKREHVARGKDEFASQIRQPKRQQWRGLRENLNHDFLRLLRIRDFLSLILTYPMTMPEQHLLRKWIDDCQALTSKYSEHIYSKSYRWMHLLSEKPLTYL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1403 181 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 85 IPR044636 GO:0003700
Glsi03g1403 181 MobiDBLite consensus disorder prediction 78 95 - -
Glsi03g1403 181 CDD SANT 12 57 IPR001005 -
Glsi03g1403 181 SMART sant 8 60 IPR001005 -
Glsi03g1403 181 FunFam Transcription factor SRM1 4 71 - -
Glsi03g1403 181 MobiDBLite consensus disorder prediction 67 95 - -
Glsi03g1403 181 Gene3D - 2 71 - -
Glsi03g1403 181 SUPERFAMILY Homeodomain-like 5 57 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1403 Glsi-ChrGlsi03 76296067 76296795 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi03g1403 None None None