Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1402 ATGAGTGGGGCTGAGCCACTCGCGGCTTCTGCTCTCGGACCAGTGGTGAGATTTGGGCTTGAAGAGCCATATAAAACTATAAGCGGCAGGGTTGCATCTTCCAAAAATTTGGAAGACATTTATGATCTCTTAAACCAAGTCCTGCACAAGCTACTTGCAATAAAAGAGGACAATGAGACACAAGTTCAGATGCACAAACAAAAAGATACTACCATGGTTTATCGATCATGGAAGAACAGAGTGTCAAACATTGCTGTGGAAGTGGATAAGTTGAGAGCCAAATATGAAAGAGAAAGGCTTCCTAGATGGCGTTTTATTCGGCGTTCAAGTCTAAGCGAGAAGATGTTAAAGAGGCACAATCAAGTTAAAGACCTTATTGAGGAGGGGCTTTCAATTAATATCCTAGTTGATTATAAATACCCAGACGCTGTCTTAAAGGTGTTAGATACTCCAGAGATAGTGGAATATACCACCCTTCAAAGTGCTCTGGAAGAAATTTTGAGATGCCTTAAAAACAAGAAAATGAATGGCATTGGAGTTTATGGAATGAAGGGAGTGGGTAAAACCACAATAATGCAGAACCTAAATAATAGTGAAGATGTTGCTATACTGTTTAATATAGTCATTTTTATAACAGTGGATGCTTATCAGAATGGTCAGAAACTTCAACAGGCAATTGCAAATCGGTTGAAGGTGGACATTGAAGGCATCAAGGACTCCACTGATGAAGTTGCCAGAAGAATACATGAAGAGCTGAAGGATAAGAAGTGTTTGTTGATTTTGGATGGGGTTGTGGACTTTATCAATTTGAAGCAATTGGGAATCCCAAATAATGACAATGGAAGTAAGGTAGTTATGGCCTCTCAGTTTCTTCATGTTTGCAACAAGAATAACATGGATAGGTTGATTGAAGTGGAACGCTTACAACAAGAGGAAGCATGGAAGATGTTTGAAAATATTGTTGGTCCTGTAATTGAACGTCCAGGCATTTCCCAAACTGCTCGGCGTGTGTGTAATAGGTGCTCTCGTCTTCCGCTTCTAATACATAAAATAGGGAGCTCTTTTAAAGTGAAAAATGATGCTCCAAGTTGGAGGGCAGCACTGGAAGATCTTGATGAACAGTGGAGAGAGCATCAAAATGAAGGTTTAGAAGAGTTTTACTCATTTATGGAGTTCTGCTATCGTCAGCTGCAAGATAAACACAAAAAATGCTTTCTATATACTTCCTTGTACCCTGCGGATAGTAAGGTTTTCACTGATTATTTGGTGGAGTGTTGGGTAGCTCAAGGCTTCCTTGGTGACATTAATGAAAGAAGAAGGTATCGAAAAGCACGGGACAATGGTCATATGATAATTGGGGACCTTGTTAATGTCTCTTTACTGGAGAAAGGAGAACGGATGATGTATGTCACCATGAGTGATTGTATGAGACAACTTGCTCTATATATTTTATATAAGCATCCTCAATATAGTTCTTATGTCAGGACTAATGAAGAATCTGAGGAGCTAACAAAATCAAAAGCTTGGGGGAATGCCACATGGGTGTCAATGATAGACACCAAACTCTGTAATTTACCCACAACTCAAGATTGCAGTTTGCTTGAGTCACTATTATTGCAGAAGAATTCAGAATTATCCACAATACCACAAAGTTTTTTTGAAAATATGAGCAATCTTCTAGTGTTAGATTTGCATAATACTGGCATTAAAGAGCTTCCATCATCTCTATCAAAGCTATCATGTCTTAAAGGGCTCTATCTCAATGCTTGTAAGCACTTGAGCAAGCTGCCAGTGGGAATAGCATCACTTCAACTTCTTGAGGTCCTTGACATTCGAGGTACCCAAGTGAGTTTTATATGTTCTTATATTGGAAGCTTGACCAATTTGAGATGCTTGCGAATTCCATATCTTGTAAGTGGTAATCAAAATGATCACCAAGGCGTGAAGGCTGAAAATTATGATGTGATTTCCAAGCTTCAACATTTAGAAGAATTGATAATTGAAGTGATATCCTACGAGCAGTGGTGCAGCCAAGTTGAGAATATCATGGAGCAGGTTACTCTACTAAAAAGACTACTCACTTTCAATTGCAGCTTTCCTTCCTCAGATATTCTCACAAGTTTTTTGGCAAGTTGGGAACAGTGGAGAGATCACAAGCAATTTACTTCATTCCAATTTTGCATTGGATGCCAGAACTCACAACGTCCCCAAATTCTTCAGTATTTTGAGGTGGGGCTCTCAAAGTATTTAAAGTACTACAATGGTGAGAAAGACGATGTGCCTATGGGAGAGGTTATTCGTGAAACTGATGCAGTTGAATTGATTTGCCACAAGGACATCACTAACCTGTCAGACTTGGGAATAGAAAGCTCGAACGATATCCGTGGATTTTTAATTGAGGAATGCAATGCAATTTCAACCATTGTAGAAGGTGATAGAAATGGACTAAGAATTGGAAGCATTTTGCCAAATTTGGAGCAACTATACTTGAGAAAATTGCCCAATTTGGAGTATGTTTTTAGGGGCATCTTGCCTCCTGAAACCTTTTGCAAACTGCATACTTTAAAATTGGAGAACTGCTCAGGGTTAAAAAACATTTTTAACATTGGAGAAATTGTGAGAATTGATGGCACAAGAAATGCAAGTATCTTGCCAAATTTGGAGAAGTTGTATTTGAAAAATTTACCGAACCTTAGATGTGTTTTCGATGGTCCTTTGCATCCTAGCACCTTTTCCAAGTTACAAATTTTAGCTTTGGAAGATTGTTCATCTTTAGACAGCATTTTCGGAAATGGAGTGATACGGAATTTCTCTGAACTTCGAAAGCTAGAAATTCAAGACTGTTTGAAAATTAAAGAACTCATTACGGTCATTGAGGACATTGAAAGAGAAGAGGATGTGCTTCCAACATTGGAGAAGATAGAGATAGCTTATTTGCCAAATTTACAGTTCATATGCAGAAAACAGATGTTGGCATGGTCATCTTTAGAGCTACTAAGGATACATGAATGTCCTAACTTGAAATCATTGCCCTTTCAGAAGGACAAGGCAGCCAAACTAAAAGCCATCAAAGGTAATCAAGAATGGTGGAATGAATTGAGGAAGACAAACAAGGAGGCCCACCAACGATTTCAAGATATTTTTGTAGCCATAGATGGCTGA 3162 0.3868 MSGAEPLAASALGPVVRFGLEEPYKTISGRVASSKNLEDIYDLLNQVLHKLLAIKEDNETQVQMHKQKDTTMVYRSWKNRVSNIAVEVDKLRAKYERERLPRWRFIRRSSLSEKMLKRHNQVKDLIEEGLSINILVDYKYPDAVLKVLDTPEIVEYTTLQSALEEILRCLKNKKMNGIGVYGMKGVGKTTIMQNLNNSEDVAILFNIVIFITVDAYQNGQKLQQAIANRLKVDIEGIKDSTDEVARRIHEELKDKKCLLILDGVVDFINLKQLGIPNNDNGSKVVMASQFLHVCNKNNMDRLIEVERLQQEEAWKMFENIVGPVIERPGISQTARRVCNRCSRLPLLIHKIGSSFKVKNDAPSWRAALEDLDEQWREHQNEGLEEFYSFMEFCYRQLQDKHKKCFLYTSLYPADSKVFTDYLVECWVAQGFLGDINERRRYRKARDNGHMIIGDLVNVSLLEKGERMMYVTMSDCMRQLALYILYKHPQYSSYVRTNEESEELTKSKAWGNATWVSMIDTKLCNLPTTQDCSLLESLLLQKNSELSTIPQSFFENMSNLLVLDLHNTGIKELPSSLSKLSCLKGLYLNACKHLSKLPVGIASLQLLEVLDIRGTQVSFICSYIGSLTNLRCLRIPYLVSGNQNDHQGVKAENYDVISKLQHLEELIIEVISYEQWCSQVENIMEQVTLLKRLLTFNCSFPSSDILTSFLASWEQWRDHKQFTSFQFCIGCQNSQRPQILQYFEVGLSKYLKYYNGEKDDVPMGEVIRETDAVELICHKDITNLSDLGIESSNDIRGFLIEECNAISTIVEGDRNGLRIGSILPNLEQLYLRKLPNLEYVFRGILPPETFCKLHTLKLENCSGLKNIFNIGEIVRIDGTRNASILPNLEKLYLKNLPNLRCVFDGPLHPSTFSKLQILALEDCSSLDSIFGNGVIRNFSELRKLEIQDCLKIKELITVIEDIEREEDVLPTLEKIEIAYLPNLQFICRKQMLAWSSLELLRIHECPNLKSLPFQKDKAAKLKAIKGNQEWWNELRKTNKEAHQRFQDIFVAIDG 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1402 1053 Gene3D - 307 391 IPR042197 -
Glsi03g1402 1053 PRINTS Disease resistance protein signature 177 192 - -
Glsi03g1402 1053 PRINTS Disease resistance protein signature 341 355 - -
Glsi03g1402 1053 PRINTS Disease resistance protein signature 909 925 - -
Glsi03g1402 1053 PRINTS Disease resistance protein signature 251 265 - -
Glsi03g1402 1053 Gene3D Ribonuclease Inhibitor 767 1045 IPR032675 -
Glsi03g1402 1053 Pfam Leucine rich repeat 534 590 IPR001611 GO:0005515
Glsi03g1402 1053 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 883 1011 - -
Glsi03g1402 1053 SUPERFAMILY L domain-like 482 1014 - -
Glsi03g1402 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 407 IPR027417 -
Glsi03g1402 1053 Pfam NB-ARC domain 162 395 IPR002182 GO:0043531
Glsi03g1402 1053 Gene3D - 392 481 IPR036388 -
Glsi03g1402 1053 FunFam Probable disease resistance protein At1g63360 394 482 - -
Glsi03g1402 1053 Gene3D - 143 304 IPR027417 -
Glsi03g1402 1053 Gene3D Ribonuclease Inhibitor 485 730 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1402 Glsi-ChrGlsi03 76259035 76262196 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1402 520 634 WRKY Transcription Factor Family AT4G12020 34.783 6.17e-06 48.5