Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1386 ATGGCGCTGATTCTGCATGCAGGGAATTACAAAAACAAAAATGCGTACAAGACACTTATTGCAGCAGAGTACATAGGGGTGAAAGTTGAATATGGCCCAAACTTTGAGATGGGTGTCTCTAATAAGACTCCTGAATTTCTCAAGATGAACCCTATTGGCAAGGTTCCTGTTTTGGAGACACCAGATGGTGCAATATTTGAGAGCAATGCAATTGCACGCTATGTTGCTCGCTTGAAGGCTGACAATACTTTATATGGATCATGTCCAATTGATTATGCTCACATTGAACAATGGATTGATTTTTCATCATTGGAGATTGATGCTAATCTTCGGACTTGGTTCATACCAAGAATAGGAGTATCTCCATACCTTCCTCCGGTTGAGGAGGCTGCAATCTCTGCATTGAAGAGAGCATTGGGTGCTTTGAACACTCACCTAGCCTCTAATACTTACCTGGTCGGGCATTCTGTGACCCTGGCTGACATCATCATGACATGCAATTTGTTTTTTGGTTTCACAAAGCTCATGACTAAGAGCTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTTTGGACCTTGGTCAACCAACCGAAATTCCAAAAGGTATTCGGTAAGGTCGAGCAGACCAAAGCTGTTCCACCTATTCAGTCTGCGAAGAAGCCTTCTCAGCCCAAGGAATCTGCTAAATCCAAGGCTAAGGATGAGCCAAAGAAAGAGACCAAGAAAGAGGAAGAAAAGCCTGTAGCAGAGGCTGAAGAAGAGGCACCAAAGCCCAAGCCCAAGAATCCTCTTGATCTTCTTCCACCAAGTAAGATGATATTGGATGAGTGGAAAAGACTCTACTCAAACACTAAGACCAACTTCCGTGAGGTTGCAATCAAAGGATTTTGGGACATGTATGATCCTGAGGGATACTCTCTTTGGTTCTGTGATTACAAATACAATGATGAGAATACTGTTTCCTTTGTGACTTTGAACAAGGTTGGTGGATTTCTGCAGCGAATGGATCTGGCTCGCAAGTATGCATTTGGGAAAATGCTTGTGATTGGCTCAGAACCGCCATTTAAGGTGAAGGGGTTGTGGCTTTTCCGTGGGCAAGAAATCCCACAATTTGTGATTGATGAATGCTATGACATGGAGCTCTACGAATGGACTAAGGTTGACATCTCAGACGAAGCTCAAAAGGAGCGTGTTAATCAGATGATTGAAGATTATGAGCCTTTTGAAGGACAGCCTCTTTTGGATGCCAAATGCTTTAAGTGA 1266 0.4313 MALILHAGNYKNKNAYKTLIAAEYIGVKVEYGPNFEMGVSNKTPEFLKMNPIGKVPVLETPDGAIFESNAIARYVARLKADNTLYGSCPIDYAHIEQWIDFSSLEIDANLRTWFIPRIGVSPYLPPVEEAAISALKRALGALNTHLASNTYLVGHSVTLADIIMTCNLFFGFTKLMTKSFTSEFPHVERYFWTLVNQPKFQKVFGKVEQTKAVPPIQSAKKPSQPKESAKSKAKDEPKKETKKEEEKPVAEAEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPQFVIDECYDMELYEWTKVDISDEAQKERVNQMIEDYEPFEGQPLLDAKCFK 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1386 421 FunFam Elongation factor 1B gamma 1 75 - -
Glsi03g1386 421 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 261 421 IPR001662 GO:0003746|GO:0006414
Glsi03g1386 421 SUPERFAMILY eEF1-gamma domain 261 421 IPR036433 GO:0003746|GO:0006414
Glsi03g1386 421 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 261 421 IPR036433 GO:0003746|GO:0006414
Glsi03g1386 421 Pfam Elongation factor 1 gamma, conserved domain 260 368 IPR001662 GO:0003746|GO:0006414
Glsi03g1386 421 FunFam Elongation factor 1-gamma 1 261 421 - -
Glsi03g1386 421 CDD GST_N_EF1Bgamma 12 78 - -
Glsi03g1386 421 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 421 IPR044628 GO:0004364
Glsi03g1386 421 MobiDBLite consensus disorder prediction 214 268 - -
Glsi03g1386 421 Pfam Glutathione S-transferase, N-terminal domain 12 77 IPR004045 -
Glsi03g1386 421 FunFam Elongation factor 1 gamma 81 217 - -
Glsi03g1386 421 MobiDBLite consensus disorder prediction 225 261 - -
Glsi03g1386 421 Gene3D Glutaredoxin 4 75 - -
Glsi03g1386 421 Gene3D - 81 216 - -
Glsi03g1386 421 SMART EF1G_2 260 368 IPR001662 GO:0003746|GO:0006414
Glsi03g1386 421 CDD GST_C_EF1Bgamma_like 91 211 - -
Glsi03g1386 421 SFLD Main (cytGST) 13 191 - -
Glsi03g1386 421 SFLD Glutathione Transferase (cytosolic) 13 191 IPR040079 -
Glsi03g1386 421 SUPERFAMILY GST C-terminal domain-like 74 214 IPR036282 -
Glsi03g1386 421 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 83 IPR004045 -
Glsi03g1386 421 Pfam Glutathione S-transferase, C-terminal domain 129 198 IPR004046 -
Glsi03g1386 421 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Glsi03g1386 421 SUPERFAMILY Thioredoxin-like 12 86 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1386 Glsi-ChrGlsi03 75945883 75950033 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1386 1 421 Eukaryotic Initiation Factors Gene Family AT1G57720 73.934 0.0 622