Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1371 ATGGTCCCCTTGATTGTCTTCGCTCTGTTCTCTCTTCTGGGTTCCTGTGCTTCTGCATCATCCTCTTTGCTCAGTGACTTCCATGTCTTGGCCTCACTCAAAGAAGGATTCCAATTCCCAGACCCAGCTCTTAGCACTTGGAACTCCTCCAATTCAAGCTCAGTTTGTTCATGGGTTGGAATCCAGTGCCACCTGGGTCGAGTTGCGTCGGTGGACCTGACAGATTTGAACCTCTATGGCTCAGTTTCTCCTTCAATTTCGAGACTTGATCGGCTCACCCACCTTTCACTTGCAGGGAACAATTTCACAGGCGGCATTGAGATCACCAACTTGAGCAGCCTCCAGTTTCTGAACATCTCCAACAACCAGTTCAGTGGCACCTTGGATTGGAACTACTCTACCATGGCGGCCTGCTTGGAAGTTCTTGATGCCTATAACAATAACTTCACTGCCTTGCTTCCTCTGGGGGTTCCGGGTTTGAAGAAGCTCAGGCACCTGGATCTTGGTGGGAACTTTTTCTATGGAAAAATCCCAGAAAGCTATGGAAGTTTAGTGGGACTGGATTATCTTTCACTAGCAGGAAATGATCTTCGTGGGAAAATCCCGGGTGAGTTAGGCAATCTGAGTAACTTGAGGGAGATTTACTTGGGCTATTACAACTCTTTTGAAGGTGGGATTCCAATGGAGTTTGGAAAGTTGGTGAATTTAGTTCATTTGGATCTTTCAAGCTGTGATTTGGATGGTTCAATTCCAAGAGAACTGGGAAATTTGAAGGAACTTGACACTCTTTACTTGCATACCAATCAGCTATCTGGTTCCATACCAAAACAACTGGGAAACTTGACTAACTTGGTGTACCTTGATCTTTCCAGAAATGCACTTACTGGGGAAATCCCATTTGAGTTCAACAATCTCCAAAACCTCAAGCTTTTCAATCTCTTCTTGAACAGATTGCATGGTTCCATACCGGACTACATTGCAGAGTTGCCAAATTTAGAGACACTTGGGCTGTGGATGAACAACTTCACAGGAGAAATTCCCCAGAATCTTGGCCTAAATGGGAAGCTGCAGCTGCTTGATTTGTCCTCCAACAAGCTCACTGGTATTATCCCACCTTATCTGTGTTCCTCAAACCAGCTTACGATTCTGATTCTCCTAGATAACTTCCTCTTTGGTCCCATACCAGAAGGTCTGGGAACATGTTACAGTCTCACTAGAGTAAGGTTAGGACAGAACTACCTTAATGGTAGCATCCCAAATGGTTTTCTTTACCTCCCTAAGCTGAATTTGGCAGAGTTGCAGAACAACTACTTGTCAGGAACCTTGTCTGAGAATGGCAATAGTTCTTCTCAACCTGTGAATTTAGGCCAACTTAATCTGTCAAACAATGGCTTATCTGGTCCTTTGCCACAGTCACTCTCAAACTTCTCTTCCATTCAGATGCTCTTCCTCAGTGGAAACCAATTCTCAGGTCCGATCCCACCTTCCATTGGAGAACTCTATCAAGTTCTAAAGCTTGATCTCAGCAGAAACTCATTTTCTGGGGAGATTCCACCTGAAATTGGAAACTGTTTCCATCTTACTTACCTTGACATGAGCCAGAACAACCTCTCTGGACCAATCCCAAATGAAATTTCCAATATCCATATCCTGAATTACTTGAACTTGTCAAGAAACCATTTGAACCAAACCATCCCAAAATCGATTGGCACCGTGAAGAGCCTCACCACTGCTGATTTCTCCTTCAATGATTTCTCAGGTAAATTGCCAGAATCTGGGCAATTTGCCTTCTTTAATGCCTCTTCTTTCGCTGGTAATCCTCAACTTTGTGGTTCTCTCTCCAACAACCCTTGCAATTTCAGCACAATCACAACCCCACCTGGAAAAAACCCAGCAGATTTCAAGCTTATTTTCGCCCTGGGTCTATTGATTTGTTCATTAGTATTCACCGTTGCAGCCATAATCAAAGCTAAATCTTTCAGAAAAAATGGCCCTGGTTCATGGAAAATGACAGCATTCCAGAAGCTGGAATTCACAGTCTCCGACATCCTCGAGTGCGTCAAAGATGGCAATGTGATCGGACGAGGAGGTGCAGGGATCGTCTACCATGGAAAAATGCCAAATGGGGTTGAAATCGCAGTAAAAAAACTCCTGGGTTTTGGCGCGAACAGCCATGACCATGGCTTCAGAGCAGAAATTCAAACACTGGGCAACATCAGACACAGAAACATAGTGCGATTACTCGCGTTCTGCTCCAACAGAGAGACCAATCTCCTCGTCTACGAATACATGAGAAACGGGAGCTTAGGCGAGGCACTGCACGGGAAAAAAGGGGCGTTTCTGGGGTGGAATTTGAGGTACAAAATTGCGATCGATTCGGCGAAGGGTCTCTGCTACCTCCACCATGATTGCTCGCCGTTGATCGTTCACCGAGACGTGAAATCGAACAATATTTTGCTGAATTCGAGCTTCGAAGCACACGTGGCCGATTTCGGGCTCGCCAAGTTCTTGATAGACAGCGGCGCCTCCGAGTACATGTCTACCATAGCAGGCTCGTACGGGTACATCGCTCCTGAGTATGCTTACACATTGAGGGTGGATGAAAAAAGTGACGTGTATAGTTTCGGAGTAGTTCTGTTAGAGCTAGTAACGGGGCGGAGGCCGGTGGGAGATTTTGGAGACGGGGTGGACCTGGTGCAATGGTGCAAGAAGGCAACGAATGGCCGGAGGGAAGAGGTGATGAACATAGTGGATCTAAGGCTAACGGTTGTGCCAAAGGAAGAAGCAAAGCACATGTTGTTCATTGCCATGTTGTGCTTGCAAGAGAATAGCGTTGAGAGGCCAACCATGAGAGAAGTAGTTCAAATGCTCTCTGAATTCCCTCACCCCTTCTCCCCACACCAAGAGTATCACCAATCTTCTTCCTCTTATTCTTCCACTCCTCTTCTCCCACCAAGCAAAGACCTTGAGAAGGAAAAACCTTGTCCTCCCACTTTCAAACAAGACCTTTTGGTTTAA 3018 0.4576 MVPLIVFALFSLLGSCASASSSLLSDFHVLASLKEGFQFPDPALSTWNSSNSSSVCSWVGIQCHLGRVASVDLTDLNLYGSVSPSISRLDRLTHLSLAGNNFTGGIEITNLSSLQFLNISNNQFSGTLDWNYSTMAACLEVLDAYNNNFTALLPLGVPGLKKLRHLDLGGNFFYGKIPESYGSLVGLDYLSLAGNDLRGKIPGELGNLSNLREIYLGYYNSFEGGIPMEFGKLVNLVHLDLSSCDLDGSIPRELGNLKELDTLYLHTNQLSGSIPKQLGNLTNLVYLDLSRNALTGEIPFEFNNLQNLKLFNLFLNRLHGSIPDYIAELPNLETLGLWMNNFTGEIPQNLGLNGKLQLLDLSSNKLTGIIPPYLCSSNQLTILILLDNFLFGPIPEGLGTCYSLTRVRLGQNYLNGSIPNGFLYLPKLNLAELQNNYLSGTLSENGNSSSQPVNLGQLNLSNNGLSGPLPQSLSNFSSIQMLFLSGNQFSGPIPPSIGELYQVLKLDLSRNSFSGEIPPEIGNCFHLTYLDMSQNNLSGPIPNEISNIHILNYLNLSRNHLNQTIPKSIGTVKSLTTADFSFNDFSGKLPESGQFAFFNASSFAGNPQLCGSLSNNPCNFSTITTPPGKNPADFKLIFALGLLICSLVFTVAAIIKAKSFRKNGPGSWKMTAFQKLEFTVSDILECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGANSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNRETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIDSAKGLCYLHHDCSPLIVHRDVKSNNILLNSSFEAHVADFGLAKFLIDSGASEYMSTIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELVTGRRPVGDFGDGVDLVQWCKKATNGRREEVMNIVDLRLTVVPKEEAKHMLFIAMLCLQENSVERPTMREVVQMLSEFPHPFSPHQEYHQSSSSYSSTPLLPPSKDLEKEKPCPPTFKQDLLV 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1371 1005 Gene3D Transferase(Phosphotransferase) domain 1 764 976 - -
Glsi03g1371 1005 Gene3D Phosphorylase Kinase; domain 1 652 763 - -
Glsi03g1371 1005 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 133 220 - -
Glsi03g1371 1005 SUPERFAMILY Protein kinase-like (PK-like) 678 957 IPR011009 -
Glsi03g1371 1005 SUPERFAMILY L domain-like 355 611 - -
Glsi03g1371 1005 SMART serkin_6 687 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1371 1005 Gene3D Ribonuclease Inhibitor 319 621 IPR032675 -
Glsi03g1371 1005 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 764 974 - -
Glsi03g1371 1005 Pfam Leucine Rich Repeat 235 257 IPR001611 GO:0005515
Glsi03g1371 1005 Pfam Leucine Rich Repeat 355 375 IPR001611 GO:0005515
Glsi03g1371 1005 Pfam Leucine Rich Repeat 526 547 IPR001611 GO:0005515
Glsi03g1371 1005 Pfam Leucine Rich Repeat 162 180 IPR001611 GO:0005515
Glsi03g1371 1005 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 333 622 - -
Glsi03g1371 1005 ProSiteProfiles Leucine-rich repeat profile. 355 376 IPR001611 GO:0005515
Glsi03g1371 1005 ProSiteProfiles Protein kinase domain profile. 687 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1371 1005 Pfam Protein tyrosine and serine/threonine kinase 690 957 IPR001245 GO:0004672|GO:0006468
Glsi03g1371 1005 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Glsi03g1371 1005 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 656 763 - -
Glsi03g1371 1005 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 25 132 - -
Glsi03g1371 1005 SUPERFAMILY RNI-like 70 414 - -
Glsi03g1371 1005 MobiDBLite consensus disorder prediction 965 1005 - -
Glsi03g1371 1005 Gene3D Ribonuclease Inhibitor 220 318 IPR032675 -
Glsi03g1371 1005 Gene3D Ribonuclease Inhibitor 137 219 IPR032675 -
Glsi03g1371 1005 SMART LRR_typ_2 281 304 IPR003591 -
Glsi03g1371 1005 SMART LRR_typ_2 184 208 IPR003591 -
Glsi03g1371 1005 SMART LRR_typ_2 354 377 IPR003591 -
Glsi03g1371 1005 SMART LRR_typ_2 329 353 IPR003591 -
Glsi03g1371 1005 SMART LRR_typ_2 233 257 IPR003591 -
Glsi03g1371 1005 SMART LRR_typ_2 500 524 IPR003591 -
Glsi03g1371 1005 SMART LRR_typ_2 548 572 IPR003591 -
Glsi03g1371 1005 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 221 326 - -
Glsi03g1371 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Glsi03g1371 1005 Gene3D Ribonuclease Inhibitor 26 136 IPR032675 -
Glsi03g1371 1005 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 187 958 - -
Glsi03g1371 1005 MobiDBLite consensus disorder prediction 967 983 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1371 Glsi-ChrGlsi03 75816559 75823020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1371 19 981 Receptor kinase-like Gene Family AT5G65700 57.712 0.0 1090
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi03g1371 PK_Tyr_Ser-Thr 2.3e-43 CL0016