Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1369 ATGCACTCAGAAAAGCAGAAGCCACCACTTCATGCAGACACCTTTCGTGCAGGTGAGCAAGCTGCAGCCATGAAAGACCCTGAGAAAAGTGGCTTAAGATCTTCTACGACAAATCATCATGACATGTCTCAAACAATAACCTTGTTCAAGAAATACCTCCTTACAAGGCCTCAAAATAACATCTTTGGTAGAACAAACATAGAGGAATCAGAAATGATAAAAAACTCTCCTTCTGATCATGCCTTATCATCAGCTTCTGCACCTAATTGTGATCCCAGATTGAATATTAATAGACCATCTACTTTGCTTGAGAGAATGCTTCTTCCTCAAATCATGAGGGGTGATGGAGTGTTGCCATCGTTGGTTTCAGCAGACAGATCTCCAACAGCTCAGCTTACTATATTTTATGATGGTGCTATTAATGTCTACGACAATGTTCCTGTTGATAAGGCTCAAGCTATTATGCTTCTTGCTGGTGAAAGCTCGTCACCAAATATTACAGATGCAGAAAGTCCAAATATAGATGCAGAAGCAACAATTCATGAATCCCATGTAACACCAAGAAGCAAACTAAAAGAAGTCCTTCCATTAGCAAGAAGGAATTCCCTCCAATGTTTCTTCCAAAAGCGTCGTGACAGGAAATTAATGAAGAAATCGCCTTCTGCTTCTCATGCTAGCCCTAGTTCAAGGAATAAGGTTGCTATGGCGATAATGAATGAAGGATTCCCAACTCAAAATCATGGCGTTTCTCTTTCCCCGTTTCCTTCGCGTCTAGCTAGGTTTCTCTGTTGCCCTAAAAGGACCATAAAGCCAATAGAAAATGGTTCAGATTGA 834 0.4077 MHSEKQKPPLHADTFRAGEQAAAMKDPEKSGLRSSTTNHHDMSQTITLFKKYLLTRPQNNIFGRTNIEESEMIKNSPSDHALSSASAPNCDPRLNINRPSTLLERMLLPQIMRGDGVLPSLVSADRSPTAQLTIFYDGAINVYDNVPVDKAQAIMLLAGESSSPNITDAESPNIDAEATIHESHVTPRSKLKEVLPLARRNSLQCFFQKRRDRKLMKKSPSASHASPSSRNKVAMAIMNEGFPTQNHGVSLSPFPSRLARFLCCPKRTIKPIENGSD 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1369 277 SMART tify_2 125 160 IPR010399 -
Glsi03g1369 277 Pfam Jas motif 196 220 IPR018467 -
Glsi03g1369 277 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 64 228 IPR040390 -
Glsi03g1369 277 MobiDBLite consensus disorder prediction 72 93 - -
Glsi03g1369 277 ProSiteProfiles Tify domain profile. 125 160 IPR010399 -
Glsi03g1369 277 Pfam tify domain 128 159 IPR010399 -
Glsi03g1369 277 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1369 Glsi-ChrGlsi03 75795677 75799431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1369 128 244 Tify Gene Family AT5G20900 30.597 1.57e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Glsi03g1369 tify 1.1e-16 No_clan