Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1338 ATGGAGGCATTTGTAGCCCCTGCTCTCGTACCAGTGGCGACATTTGCTTTTGAAGAGTCTGTTAAATATATAAAAGGCCTACTTGCATCTTCCCAAAATTTGAAAGACCGTTACGATTTGTTAAGCCAAGGCCGGCAACAACTACTTGCGATACAAAGGGATAAGGAGAATCAAGTTCAAAGTAACAAACATAAAGATACCACTATGGTTTACCGCTCATGGAAGAAAAGGGTATCAAAAAATGTTGCAGAAGCGAAGGAATTGATATCCAAATATGATACAGAACGACTTCCCGAACGGCGTTTATTCAGGCGCTCAAGTCTAAGTGAGGAGATGGCAAAGATGCACAGCAAAGTTAAAGAACTTATTGAAGAGGGGAATTCAATCAATATCCTAGCTGGTTATAAAACCCCAGAGACTGTCTTAAAAGTGTTAGATACTCCAAACATAATGGAATATCCAACACTTCAAAGTGTTCTCCAAGAAATTTTGGGTTGCCTTGAAAATGGACAAATGAAAGCCATTGGAGTTTGGGGAATGAAGGGTGTGGGTAAAACCACCATAATGCAGAACCTGAATAACAGTGAAGAGGTTTCTAACCTGTTTGATGTGGTTATTTTTATAACTGTGTTAGCAGATCATAACCTTCAACAGGCAATTGCAAATCGGTTGAGAGTGGACAGTGAGGGCATCAAAGACAACACTGATGAGGCTAGAAGAATATATGAAGAGCTGAAAAATAAAAAATATTTGTTGATTTTGGATGGGGTTGTGGACTCTGTTAATTTGAAGGAACTGGGAATCCCAAACAATGACAACGGAAGTAAGGTAGTTATGGCCTCTCAGTCTCTTCATGTTTGCAACAAGAACAACATGGATAGGTTGATTGAAGTGAAACGCTTACAACATGATGAAGCATGGAAGATGTTTCGACATATTGTTGGTCCTGTAATTGAACGTCCAGGCATTTCACCAACAGCTCGGCGTGTGTGTAAGAGGTGCTCTTGTCTTCCACTTGTAATACACAAGATAGGGAGCACTTTTAAATTGATAGATGATGCTCCAGGTTGGAGGGCAGCACTGGAAGATCTTGACAAACAATGGAGAACGCATCAAAATGAAGGTTTAGAAGAGTTGTACTCATCTATGGAGGTCTGCTATCTTCAGCTGAAAGATGAATACCAAAAATGCTTTTTATATACTTCCTTGTACCCTGCAGATAGTAAGGTTTTCACACATTATTTGGTAGAGTGTTGGGCAGCTCAAGGCTTCCTTGGTGATGTTGGAAGTTACCGACGAGCACGCGACAACGGTCATAAGATAATTAGGTACCTTGTTAAAGTCTCTTTACTGGAGGAAAGAGAACCGAAGATGTTTGTCACCATGAGTGGTTGTATGAGACAACTTGCTCTGTATATATTATCTAAGCATTCTCACTACAAGTCTTATGTCCAGACCACTAACGAAGAGTTTGAAGAGCCCCAAGAACCAAAAACTTGGCCAAGAGCTACATGGGTATCAATAATAGACTCCGAACTGTGTGATTTACCCATAAGTGAAGATTGTCATATGCTTGAGAGTCTATTATTGCAGAAGAATTCAAAATTAGTCACAATCCCACAAACATTTTTTGAAAAAATGAGTAAACTTCTTGTGCTAGACTTGTATGGTACTGCCATTGAAAAGCTTCCATCATCGCTATCGAAGTTGACTGGTCTCAAGGGGCTCTATTTGAATGCTTGTAATTAA 1749 0.3979 MEAFVAPALVPVATFAFEESVKYIKGLLASSQNLKDRYDLLSQGRQQLLAIQRDKENQVQSNKHKDTTMVYRSWKKRVSKNVAEAKELISKYDTERLPERRLFRRSSLSEEMAKMHSKVKELIEEGNSINILAGYKTPETVLKVLDTPNIMEYPTLQSVLQEILGCLENGQMKAIGVWGMKGVGKTTIMQNLNNSEEVSNLFDVVIFITVLADHNLQQAIANRLRVDSEGIKDNTDEARRIYEELKNKKYLLILDGVVDSVNLKELGIPNNDNGSKVVMASQSLHVCNKNNMDRLIEVKRLQHDEAWKMFRHIVGPVIERPGISPTARRVCKRCSCLPLVIHKIGSTFKLIDDAPGWRAALEDLDKQWRTHQNEGLEELYSSMEVCYLQLKDEYQKCFLYTSLYPADSKVFTHYLVECWAAQGFLGDVGSYRRARDNGHKIIRYLVKVSLLEEREPKMFVTMSGCMRQLALYILSKHSHYKSYVQTTNEEFEEPQEPKTWPRATWVSIIDSELCDLPISEDCHMLESLLLQKNSKLVTIPQTFFEKMSKLLVLDLYGTAIEKLPSSLSKLTGLKGLYLNACN 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1338 582 Coils Coil 105 125 - -
Glsi03g1338 582 Gene3D - 140 297 IPR027417 -
Glsi03g1338 582 Pfam Leucine rich repeat 525 581 IPR001611 GO:0005515
Glsi03g1338 582 SUPERFAMILY L domain-like 497 581 - -
Glsi03g1338 582 Coils Coil 75 95 - -
Glsi03g1338 582 Pfam NB-ARC domain 161 387 IPR002182 GO:0043531
Glsi03g1338 582 Gene3D - 383 469 IPR036388 -
Glsi03g1338 582 Gene3D Ribonuclease Inhibitor 470 582 IPR032675 -
Glsi03g1338 582 PRINTS Disease resistance protein signature 568 582 - -
Glsi03g1338 582 PRINTS Disease resistance protein signature 334 348 - -
Glsi03g1338 582 PRINTS Disease resistance protein signature 244 258 - -
Glsi03g1338 582 PRINTS Disease resistance protein signature 174 189 - -
Glsi03g1338 582 Coils Coil 228 248 - -
Glsi03g1338 582 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 400 IPR027417 -
Glsi03g1338 582 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 60 581 - -
Glsi03g1338 582 Gene3D - 300 382 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1338 Glsi-ChrGlsi03 75342904 75344652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1338 141 301 WRKY Transcription Factor Family AT4G12020 26.590 1.91e-06 49.3