Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1331 ATGCTTCGTTGGAAAGCAAAAACTACGATTTACATCAGTGTCAGTGAGCGTCTTGACGAACACAGTTGCATGCAGCTTGCTGCAATGCGGATTGGAACAATCATTCCCAACATTGAGTTGAACCCGGGGAAAGGTGCCAAACTGGTCCGAGCAGCTGGAACTAGTGCAAAGATACGGAAGGAGCCTGCATCAAGATACTCTTTAGTTCAACTCGCTTTCAGTGTGAAAAAGTTGATCGATTCTCGTTGCAGGGCCACAATTGGTACAATTTCTAATCCAAGCCATGGAGATCGGAAGCTTAGGAAGGCTGGGCAGATCGAGCTGGTGGCTAGGTTGAAGGTCAGTGGTTCGAGGAGTGGCCATGAATCCTGTGGATCATCCTCATGGTGGAGGAGAGGGTAA 402 0.4851 MLRWKAKTTIYISVSERLDEHSCMQLAAMRIGTIIPNIELNPGKGAKLVRAAGTSAKIRKEPASRYSLVQLAFSVKKLIDSRCRATIGTISNPSHGDRKLRKAGQIELVARLKVSGSRSGHESCGSSSWWRRG 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1331 133 Gene3D - 15 92 IPR014722 -
Glsi03g1331 133 Pfam Ribosomal Proteins L2, C-terminal domain 22 107 IPR022669 GO:0003735|GO:0005840|GO:0006412
Glsi03g1331 133 PANTHER RIBOSOMAL PROTEIN L2 4 109 IPR002171 GO:0003735|GO:0005840|GO:0006412
Glsi03g1331 133 SMART Ribosomal_L2_C_2 18 131 IPR022669 GO:0003735|GO:0005840|GO:0006412
Glsi03g1331 133 SUPERFAMILY Translation proteins SH3-like domain 23 111 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1331 Glsi-ChrGlsi03 75279547 75280722 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1331 22 105 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 34.118 3.57e-07 45.8