Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1330 ATGGAACCAAAACTAGTGTTCACTAAGAAGCTCACTGACACTGACATCGGTCACAGTTTGTCCTTTCCAACGAAACATCTGGGCATTCTCCCACAAGCTGCAGGTTATCCATATCATCTAGTGAGGTTTCAAGCGAGCTGTGGAGGTCAGGTGCGAACGTTTCGCTGCAGAAAACGAAGAAATGGATCTTTGAAACCAGTTATACAAAGTGGTTGGCGTGGTCTTGTTAAGGATAACAGGGTCCAAATTGGTGATCTGTTGGAATTCTACATGCAAGCAAATGACGATGGAGTAACACGCTATTGGATTAAAATTTACCGATTCGAGTACTACACCGATGAGATGGGTACAACACGGGAGTCGGACTTGTACCCACCCTTGGTTTGCCCCAAGGATAAACAGACACTCTCCCATATCTTCCACTGCTCATGCTCTTACCCTCTCCTCCACCATGAGGATGATCTGCGGGATTCATGGCCACTCCTCGAACCACCAGCCTTCGACCTAGCCACCGGCTCTGCCCAGCCTTCCTAA 534 0.4813 MEPKLVFTKKLTDTDIGHSLSFPTKHLGILPQAAGYPYHLVRFQASCGGQVRTFRCRKRRNGSLKPVIQSGWRGLVKDNRVQIGDLLEFYMQANDDGVTRYWIKIYRFEYYTDEMGTTRESDLYPPLVCPKDKQTLSHIFHCSCSYPLLHHEDDLRDSWPLLEPPAFDLATGSAQPS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1330 177 CDD B3_DNA 7 107 IPR003340 GO:0003677
Glsi03g1330 177 Gene3D - 4 113 IPR015300 -
Glsi03g1330 177 Pfam B3 DNA binding domain 41 106 IPR003340 GO:0003677
Glsi03g1330 177 SUPERFAMILY DNA-binding pseudobarrel domain 4 95 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1330 Glsi-ChrGlsi03 75270191 75273142 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Glsi03g1330 B3 4.1e-08 CL0405