Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1327 ATGAATTTTGTCATTTTGAAATCTTATACTCCATGTAGCAACTGTTATGTTGTCAATTTCAAATGGAAAAATGTATCTTGGCTTGATCAGTTTGTGTGCATGTTGGCTGCATGTGCCTTTTGGCATTGCATTTTGGGATCTCGAATATTTAATCTGCAAAGGTATTCTTCTTTTATGGAAAATTCAATGAGCTCATCAGGCACTAGAAATTTTATGTATTCTGGAAAGCATGCTCTGCTTCCTCCTAAAAGTCCATTCCCTAATGTTTCCCAAGCATATTCTGATTATGTCCCAAATACTACAATTGGTTATCAAAGACCTAGAGGGGGAAATACACCCCTTAGACGGACATCATCTGAGAGCCTTGTCAATGTCATAGAGGAGCAGCCTTCATGGCTGGACGATCTCCTTAATGAGCCAGAGACACCTGTCCGTAAGGGTGGTCATCGGCGTTCTTCTAGTGATTCTTTTGCATACATAGATGCTGCTAATGTTTTTAATACCAGTTACACAGATCAGGATGAGTATAAATATAAGAATCGGATATCTATTCCATCTTGGGCATCACAAGACTTAGATCAAGGCAAAGATGCTCTCCAAATCTCCATGCATGCAGAAATGAACTCAGCAAAACAGAAAAATAGGGCATGGGAATCGTCTGTCAATGCTGTGACATATCCAATTGGTGTTTCCTCTGGGAGGGACAATGTTGCTTTGCAGAGTTCAGGATCATTTGCTCCACACGAAGCAGATGGGGTTGTGCCAACTGCAAATGGGAAGCATGATTCAGTAGACTCTGGTGCACAGGACACAAAAGCATCTTCTGGAAGAAAGGATGGATCACATGCAAAGCCGTCTGCTCCTGTAACAGATGCAAAACGTGCTAAACAGCAATTTGCTCAACGTTCACGGGTCCGTAAACTTCAATACATAGCTGAGCTGGAACGAAATGTGCAAGGTTTACAGGCAGAAGGGTCTGAAGTATCAGCCGAGCTTGATTTTCTTAACCAGCAGAATCTCATTCTGAACATGGAGAATAAAGCCCTCAAGCAACGTCTAGACAATTTAGCACAGGAGCAGCTTATCAAATATTTGGAGCAGGAAGTTCTGGAAAGAGAGATTGGAAGATTAAGGGGGATGTATCAGCAGCAGCAGCAACAGCAACAACATCAACATCTTCTGCAACAGAAACCATCTGCTAGCCATCGACGAACAAACAGCAGAGACCTTGAATCCCAGTTTGCAAACCTTTCTTTATAA 1260 0.4198 MNFVILKSYTPCSNCYVVNFKWKNVSWLDQFVCMLAACAFWHCILGSRIFNLQRYSSFMENSMSSSGTRNFMYSGKHALLPPKSPFPNVSQAYSDYVPNTTIGYQRPRGGNTPLRRTSSESLVNVIEEQPSWLDDLLNEPETPVRKGGHRRSSSDSFAYIDAANVFNTSYTDQDEYKYKNRISIPSWASQDLDQGKDALQISMHAEMNSAKQKNRAWESSVNAVTYPIGVSSGRDNVALQSSGSFAPHEADGVVPTANGKHDSVDSGAQDTKASSGRKDGSHAKPSAPVTDAKRAKQQFAQRSRVRKLQYIAELERNVQGLQAEGSEVSAELDFLNQQNLILNMENKALKQRLDNLAQEQLIKYLEQEVLEREIGRLRGMYQQQQQQQQHQHLLQQKPSASHRRTNSRDLESQFANLSL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1327 419 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 66 419 IPR044797 -
Glsi03g1327 419 MobiDBLite consensus disorder prediction 381 401 - -
Glsi03g1327 419 SMART brlzneu 289 348 IPR004827 GO:0003700|GO:0006355
Glsi03g1327 419 MobiDBLite consensus disorder prediction 239 300 - -
Glsi03g1327 419 Coils Coil 367 387 - -
Glsi03g1327 419 Gene3D - 291 349 - -
Glsi03g1327 419 MobiDBLite consensus disorder prediction 381 419 - -
Glsi03g1327 419 SUPERFAMILY Leucine zipper domain 300 342 IPR046347 GO:0003700|GO:0006355
Glsi03g1327 419 Coils Coil 304 359 - -
Glsi03g1327 419 CDD bZIP_plant_RF2 292 339 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1327 Glsi-ChrGlsi03 75232818 75243546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1327 289 363 bZIP Transcription Factor Family AT2G42380 55.000 6.24e-18 81.6