Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi03g1326 | ATGGGTAAGGGGCCCTTCTGCTTTCGCGGCTCCAGCACGCGCCGTCGCCGCCATAAGAAGGGGGCTGAGCTGCCGCAACAGGCCACCGGAGGGGCCGGCTCTCCGGGTAGCCACAACAACGGCGGTGGCTCGATAGCCAAGGCCAAGAAGAAGACCGGTGGAGCGAGGTTGTGGATGAGGTTTGATCGTTCGGGTCAATCAGAGCTCGTTGAGTTGGATAAGAACGCGGTTATCAGTCGTGCGGCGATTCCCACCAGGGATTTGAGAATTTTGGGCCCCGTCTTCTCCCACTCCTCCAATATCCTTGCCAGGGAGAAAGCAATGGTAGTTAATTTGGAGTTTATAAAGGCCATAGTCACTGCTGAAGAAGTGCTGTTGCTTGATCCTTTTTGCCAGGAGGTTCTCCCATTTGTTGAACAACTAAAGCAACAACTTCCATATAAAAGCCAACCTAAACTTCATGGCCCTTCAGATGAACAAGAAAATGGAGTGCAGGTTTCAACTGGCAGACAATGGTTACAAGTGCCAGAGGCTGCTGAAGGTTTGCAGCATGAGCTACCATTTGAGTTTCAAGTTCTGGAGATTGCTTTAGAAGTTGTCTGTACATATCTGGACTCAAGTGTCGCAAACCTTGAGAGAGGTGCGTACCCTGTACTGGATGAATTGGCTACAAATGTCAGCACCAAGAATCTTGAACATGTGCGAAGTTTGAAGAGTAATCTTACTCGATTGCTGGCACGTGTGCAAAAGGTGCGGGATGAAATTGAACATCTGTTAGATGACAATGAAGACATGGCACAATTATATTTGACTAGGAAGTGGATGCAGTCTGAGGCCCTTTCTGTACCCTTAACCTCAAATAGCCTCACTAGTACTGCAGCCTATGCTCGTCAATTTTCTAACAGAAGCGGAAGTCTTGTGATTAGCAACTTTGGGGATTATAATGACGTGGAGGACCTGGAGATGTTGCTTGAGGCATATTTTATGCAGTTGGATGGAACTCGTAACAAGATATTATCCGTTAGGGAGTATATTGATGACACAGAAGACTACGTCAACATCCAACTCGACAACCAGCGAAATGAACTCATTCAGCTGCAGTTGACATTGACCATTGCATCATTTGCTATTGCCATTGAAACTCTGATCGCGGGTGCATTTGGAATGAACATACCTTGTCAATTATATAAAATAGATGGAATATTTTGGATCTTTGTTTGGTCCACTAATGCAGCTTGCGTATTGCTCTTCCTATTTATTTTAGGATATGTAAGATGGAAAAATTTACATGGTTGA | 1296 | 0.4576 | MGKGPFCFRGSSTRRRRHKKGAELPQQATGGAGSPGSHNNGGGSIAKAKKKTGGARLWMRFDRSGQSELVELDKNAVISRAAIPTRDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPFCQEVLPFVEQLKQQLPYKSQPKLHGPSDEQENGVQVSTGRQWLQVPEAAEGLQHELPFEFQVLEIALEVVCTYLDSSVANLERGAYPVLDELATNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWMQSEALSVPLTSNSLTSTAAYARQFSNRSGSLVISNFGDYNDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFAIAIETLIAGAFGMNIPCQLYKIDGIFWIFVWSTNAACVLLFLFILGYVRWKNLHG | 431 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi03g1326 | 431 | CDD | Mrs2_Mfm1p-like | 58 | 429 | IPR039204 | - | |
| Glsi03g1326 | 431 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
| Glsi03g1326 | 431 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 27 | 430 | IPR039204 | - | |
| Glsi03g1326 | 431 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 368 | 419 | IPR045863 | - | |
| Glsi03g1326 | 431 | Gene3D | - | 44 | 129 | - | - | |
| Glsi03g1326 | 431 | FunFam | magnesium transporter MRS2-4 | 133 | 363 | - | - | |
| Glsi03g1326 | 431 | FunFam | Magnesium transporter MRS2-1 | 46 | 129 | - | - | |
| Glsi03g1326 | 431 | Gene3D | Magnesium transport protein CorA, transmembrane region | 132 | 363 | - | - | |
| Glsi03g1326 | 431 | Coils | Coil | 234 | 268 | - | - | |
| Glsi03g1326 | 431 | Pfam | CorA-like Mg2+ transporter protein | 322 | 425 | IPR002523 | GO:0016020|GO:0030001|GO:0046873|GO:0055085 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi03g1326 | Glsi-ChrGlsi03 | 75229537 | 75232627 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi03g1326 | 1 | 431 | MRS2 Gene Family | AT3G58970 | 66.143 | 0.0 | 558 |