Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1322 ATGTGGTGGAAAAATGAACCATTTTCGAGTTGCCGTGTTTTATGGTCAGTATCAGTAAAGCTTGGATTTTGGATGTTGTATTTAAAGCTTTGTATTGACTGCCTCATGGTCTCCAGGCAAAAAGTTGCTCAATTAATGAGCCTTCAGTTACATGCCTATAGTTTTAATGCCTTCAAGACTGATTATGTTTTATTAATGCTGGATGAAATAGATAATGAGAAACAGTGCATCCTTTTGAATTCTTTGGTTGAAATGTCTAGTCCCCGTGACAAACCCCCAAAGTCTCCGTACAAGGGAGTCGAAGGCATTGAAGAACCAGTTTTCTTGCATGGTGACTTGGATCTATGGATATTAGAAGCAAAATCTCTTCCAAATTTGGATTTATCTACTGAAACAATGAGAAAATGTTTCACTATAGGCAACAGTTGTACACCTCCCTTTGTAAAAGGACTAAAGACACACTCTGGGAAACATAAAATGATTACGAGTGATCCTTATGTCTCTGTCAGCCTAGCAGGGGCTACCGTAGCTCAAACTAGAGTAATTGCCAATTGCGAGAACCCTTTGTGGGATGAGCATTTTATTGTCCCAGTTGCTCACCCTGTTCAGAAAATTGTGTTTGTTGTGAAAGATAATGATGTTCTTGGGGCTGAACTTATTGGAGTAGTGGAGATATCTGTTCAGAAGATTTTGTCAGGAAACACTGTTAATGATTGGTTTCCCATTATTGGCCAATACAGAAACTGCTTAAAACCTTATCCTGAGTTGCATATTTCTGTGAAGTTTAAGCCAGTTGGAGACAATATCAGTATTGGGGCTGGGACAGATTATATGGGTGTCCCTAATACATATTTCCCTCTCCGAAAAGGAGGGAGTGTGACTCTTTATCAAGATGCACATGTTCCGGATGCTATGCTCCCTGAAATTTCACTTGACGGTGGAAAAGTCTTTAAGCAGGGTAAATGTTGGGAGGACATATGCCATGCGATTTTGGAAGCTCACCACCTAATATATATTGTAGGATGGTCCATTCACCACCCTATAAAGCTTGTCAGAGAACCAACAAAACCCTTACCTGCTGGTGGAGAGCTTTCACTTGGAGAATTGTTAAAATACAAGTCACAAGAAGGGGTCCGGGTGGTTATGCTGATTTGGGATGACAAAACTTCACATGACACGTTTTTTTTGAAAACAGAAGGTGTCATGCAAACCCATGACGAAGAAACAAAAAAGTTCTTTAAACACTCCACTGTTCATTGTGTGCTTGCCCCACGTTATGCAAGCAATAAGCTCAGTATTTTCAAGCAACAGGTTGTGGGAACCCTTTTTACACATCATCAGAAATGTGTTCTTCTTGACACTCAAGCTTCTGGGAATAACAGGAAAATAACTGCTTTTATTGGGGGCCTGGATCTGTGTGATGGCAGATATGATACTCCCGAGCATCGGCTTTTTGATGATCTAGATACTGTCTTTAAAGATGATTTTCATAATCCTATACTTCCATCAAATTCTGGTGGACCAAGAGAACCATGGCATGATTTACATTGCAAAGTTGAGGGTCCTGCTGCTTATGATATATTGACTAATTTTGAACAAAGATGGAGGAAAGCCAAAAAATGGCGGGACTTCAGGCTAAAAAAGGTTACAAATTGGCATGATGATGCTTTGCTTAGGCTAGACCGAATATCATGGATTCTCTCACCATCTACTGGTTCTGATGGTGATAAAGCTGTCCATGTAATGGATGATAATGATCCTGAGAATTGGCATGTGCAGGTATTTCGGTCCATAGATTCAGGATCAGTGAAGGGTTTTCCAAAGGATGTTAAGGAAGCTAAGGCTCAGAATCTTTTCTGTGGAAAAAACTTGAAAGTCGATAAAAGCATCCATGCTGCTTATGTACATGCGATAAGATCAGCTCAACACTTCATATATATAGAGAATCAGTATTTTCTGGGGTCCTCATATCATTGGCCTTTGTACAAAACTGCCGGTGCAAATAATTTGGTTCCTATGGAGTTGGCTTTGAAAATTGCTAGCAAGATCAAAGCAAACGAACGTTTTTCTGTGTATATAGTTATCCCAATGTGGCCAGAGGGAGTTCCATCCAGTGCTGCTGTGCAAGAAATCTTGTTCTGGCAGGGACAGACTATGTCTATGATGTACAACATTATTGCAGATGCCCTTAAAAAGTCAGGCCTCTCTGATCGTTATCATCCACAAGATTATCTCAACTTTTACTGCCTTGGAAAGAGTGAACCTCAATGTTCAGAAAGTCCATCTACATCATATCAGTCAGCTGAAAACCGTAGCGCTTTGGCATCAGTCAAAAAATTCAGACGGTTTATGATTTACGTTCATGCCAAAGGAATGATAGTTGATGATGAATATGTAATCATGGGATCTGCAAATATTAACCAGAGATCCTTGGATGGTTCAAGGGACACGGAAATTGCTATGGGTGCTTATCAGCCAAAATATACATGGGCAGAAAAGAATTCTCATCCTCATGGCCAGGTTTATGGTTATCGAATGTCTCTCTGGGCCGAGCACCTGGGTAGTATTGATGATGCTATTGATGAACCAGAGAGCCTGAAATGTATGAGATATGTCAACAATATTGCTAAACATAACTGGGGCGCATATGTTTCTGAGGAAGGAAGGCAGATGTGGGGACACTTGATGCAGTATCCAATTCAGGTCAGCTCGGATGGAAGAGTCAGTGCACTGCCAGACTATGAGTCCTTTCCTGATGTTGGTGGTAAAATTCTTGGATCACCCAACTCTCTTCCTGATGCGCTTACCACATGA 2814 0.4072 MWWKNEPFSSCRVLWSVSVKLGFWMLYLKLCIDCLMVSRQKVAQLMSLQLHAYSFNAFKTDYVLLMLDEIDNEKQCILLNSLVEMSSPRDKPPKSPYKGVEGIEEPVFLHGDLDLWILEAKSLPNLDLSTETMRKCFTIGNSCTPPFVKGLKTHSGKHKMITSDPYVSVSLAGATVAQTRVIANCENPLWDEHFIVPVAHPVQKIVFVVKDNDVLGAELIGVVEISVQKILSGNTVNDWFPIIGQYRNCLKPYPELHISVKFKPVGDNISIGAGTDYMGVPNTYFPLRKGGSVTLYQDAHVPDAMLPEISLDGGKVFKQGKCWEDICHAILEAHHLIYIVGWSIHHPIKLVREPTKPLPAGGELSLGELLKYKSQEGVRVVMLIWDDKTSHDTFFLKTEGVMQTHDEETKKFFKHSTVHCVLAPRYASNKLSIFKQQVVGTLFTHHQKCVLLDTQASGNNRKITAFIGGLDLCDGRYDTPEHRLFDDLDTVFKDDFHNPILPSNSGGPREPWHDLHCKVEGPAAYDILTNFEQRWRKAKKWRDFRLKKVTNWHDDALLRLDRISWILSPSTGSDGDKAVHVMDDNDPENWHVQVFRSIDSGSVKGFPKDVKEAKAQNLFCGKNLKVDKSIHAAYVHAIRSAQHFIYIENQYFLGSSYHWPLYKTAGANNLVPMELALKIASKIKANERFSVYIVIPMWPEGVPSSAAVQEILFWQGQTMSMMYNIIADALKKSGLSDRYHPQDYLNFYCLGKSEPQCSESPSTSYQSAENRSALASVKKFRRFMIYVHAKGMIVDDEYVIMGSANINQRSLDGSRDTEIAMGAYQPKYTWAEKNSHPHGQVYGYRMSLWAEHLGSIDDAIDEPESLKCMRYVNNIAKHNWGAYVSEEGRQMWGHLMQYPIQVSSDGRVSALPDYESFPDVGGKILGSPNSLPDALTT 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1322 937 SMART C2_3c 112 239 IPR000008 -
Glsi03g1322 937 Gene3D C2 domain 107 263 IPR035892 -
Glsi03g1322 937 Gene3D Endonuclease Chain A 315 557 - -
Glsi03g1322 937 PIRSF PLD_plant 100 937 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Glsi03g1322 937 SUPERFAMILY Phospholipase D/nuclease 281 543 - -
Glsi03g1322 937 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 783 810 IPR001736 GO:0003824
Glsi03g1322 937 Pfam PLD-like domain 635 819 IPR025202 -
Glsi03g1322 937 Pfam Phospholipase D C terminal 857 927 IPR024632 -
Glsi03g1322 937 Pfam C2 domain 111 242 IPR000008 -
Glsi03g1322 937 SUPERFAMILY Phospholipase D/nuclease 615 858 - -
Glsi03g1322 937 Pfam Phospholipase D Active site motif 442 476 IPR001736 GO:0003824
Glsi03g1322 937 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 441 476 IPR001736 GO:0003824
Glsi03g1322 937 FunFam Phospholipase D delta 313 556 - -
Glsi03g1322 937 Gene3D Endonuclease Chain A 585 835 - -
Glsi03g1322 937 PANTHER PHOSPHOLIPASE D 106 926 IPR015679 -
Glsi03g1322 937 SMART pld_4 783 810 IPR001736 GO:0003824
Glsi03g1322 937 SMART pld_4 441 476 IPR001736 GO:0003824
Glsi03g1322 937 ProSiteProfiles C2 domain profile. 92 240 IPR000008 -
Glsi03g1322 937 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 108 265 IPR035892 -
Glsi03g1322 937 CDD C2_plant_PLD 106 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1322 Glsi-ChrGlsi03 75195206 75215777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1322 107 936 Phospholipase D Gene Family (Wang group) AT2G42010 54.704 0.0 947