Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1315 ATGGCGATAGGTAGCGCGACGGAGGTTCCTCCTCACGATGATTGCTGCCCAGTGTGCCATGACGATTTCCACCTCCCATGCCGCACCTCCTGCTCCCACTGGTTCTGCGGAGAGTGCATATTAAATGTATGGCTACATGGAGATGCAATGAAGAGATGCAGATGCCCAATGTGCTGCTGCCATTTTTCCAGTCTGGCACCCTTACAAGCAGCATTTGACTGTAGCCAGGATGCGGAATCTAATAAAATTATGGAAAATGTGAGAAGGTACAACAGGTTGCACATTGGGGGCATGCAAGGTCTCTTTCAGAAACTTTTTGATCTCCCATTTTTTGCTCGGATGGCTCTACAAGATATGATGGATCCTGATAAAACAATTTCTTACTTGACTAGAGTGCGTCTTTTTGCAATGCTACTTGGCATGATCTATGTGCTCAACCCCTTCGACTTCCTTCCATTTGCTAAACGAGACATATTAAATTTGTTTGACCTCTATGCGACTACTTTTGTAACTATCATGCATGTTATTGCGCTGTGTCGTGCAAGACGTTTGATTAGGAGATAA 564 0.4486 MAIGSATEVPPHDDCCPVCHDDFHLPCRTSCSHWFCGECILNVWLHGDAMKRCRCPMCCCHFSSLAPLQAAFDCSQDAESNKIMENVRRYNRLHIGGMQGLFQKLFDLPFFARMALQDMMDPDKTISYLTRVRLFAMLLGMIYVLNPFDFLPFAKRDILNLFDLYATTFVTIMHVIALCRARRLIRR 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1315 187 PANTHER UNCHARACTERIZED 7 183 IPR038896 GO:0061630
Glsi03g1315 187 ProSiteProfiles Zinc finger RING-type profile. 16 58 IPR001841 -
Glsi03g1315 187 SMART ring_2 16 58 IPR001841 -
Glsi03g1315 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 105 IPR013083 -
Glsi03g1315 187 SUPERFAMILY RING/U-box 8 63 - -
Glsi03g1315 187 ProSitePatterns Zinc finger RING-type signature. 31 40 IPR017907 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1315 7 137 C3H Transcription Factor Family AT4G33940 41.985 1.90e-39 131