Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1275 ATGGGAAGAGGCAGAGCAACTGTGGGTGTGATGCTAATACTAGTGTGCTTGTTGGTGCTACACTTAGAGACGGGTGATGCAGCCACTTACACGGTTGGAGGTGCACCTGGTTGGACCTTTAACACTGTTGGGTGGCCTAAAGGAAAGCGCTTTAAGGCCGGTGATACCCTTGTGTTCAATTATAGACCTGGGGCTCACAATGTGGTAGCAGTAAACAAGGCTGGCTATAAAACATGCAGGACTCCAAAAGGTGCCAAAGTGTATGTGTCAGGAAAAGATCGGATCAAGCTTGTTAAAGGGCAAAACTACTTCATATGCAACTTTGTTGGTCACTGCCAGTCTGGGCTTAAAATTGCCATCAATGCTCTCTGA 372 0.4704 MGRGRATVGVMLILVCLLVLHLETGDAATYTVGGAPGWTFNTVGWPKGKRFKAGDTLVFNYRPGAHNVVAVNKAGYKTCRTPKGAKVYVSGKDRIKLVKGQNYFICNFVGHCQSGLKIAINAL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1275 123 FunFam basic blue protein-like 28 122 - -
Glsi03g1275 123 CDD Plantacyanin 28 122 IPR041844 -
Glsi03g1275 123 PANTHER BLUE COPPER PROTEIN 21 121 IPR039391 GO:0009055
Glsi03g1275 123 SUPERFAMILY Cupredoxins 28 122 IPR008972 -
Glsi03g1275 123 Pfam Plastocyanin-like domain 38 115 IPR003245 GO:0009055
Glsi03g1275 123 Gene3D - 28 122 IPR008972 -
Glsi03g1275 123 ProSiteProfiles Phytocyanin domain profile. 28 123 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1275 Glsi-ChrGlsi03 74778869 74779622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1275 8 123 Phytocyanin Superfamily AT1G17800 39.669 2.51e-22 84.0