Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1268 ATGGAGGATGCCAAGCGAAAGCATCTGAAGCCCAAGCTCGAGCGCCGAAACGCTATGAAGAACATCAATTACCATGTACCCTCCTCCATTGCTCCATTTGACGACACCTCCTCCAATCTTCGAACTCACTCCCTCGATCTTTCCCCTTCTCTGGAGCACCAAACCAGCTTCCGGGTCAAGGGCATCGATGGCGAGTTCGACTTAATTTTCCGCAGTCTTGGACTTTCTGGTCCAGACGACTTCGCAATTCCAACTGCGGCTTGGGAAGCCCAAAAGGCTCGCTCTAGACTATCGCTGGAGAAGAAGGTGGAGGATGAGAAATCAGCTAAATTTGAAACTGGGGCTGGGATTCACAGTGATATCAAGTCGAAAACTGAGAGCTTTGTAATTTCACCTCGTGATGAAGGGAAGGTTGATGTTTCTTTCGATTCAAAGCCTTTGAGGTACAATAAAGATGGGGGTGGGGGAATCAAGGGTGTTAGGCCTCCCGTTCTTTCACCGCCGCCTGTGATGTTGCCGCCACTTCTCGATGAAGTGAGCTCCACTTGGGATTTACTGAAATCTCTTGCTGATGGAGTTGTTGATACACCAATTCGCGATGGGGGTGTTAGTGCTTCGGGCGAGGAAGATGATAGGGGCGTCGAAGAAAATGAGGGGGTTGATCGAGGAATTGACAGTGATATGAGACATGAGGAAAGCAATCTTCTTTCAGATTCTAGTTCATTTACGTCCCATGAAGACGATGAAAGTGATGCTGGCGGTAATAAGGTTTCTGGTGGGGTTGACGATTCGGTGTATAATGTCTCGCCAAATGGGTCATTTAGACGCATTTTTAATTCGTGGCAAAAGGGTGAAATTTTGGGAAAGGGGTCATTTGGAACGGTGTATGAAGGCTTTACGGATGATGGATTCTTTTTCGCGGTAAAGGAGGTGTCTTTGCTGGATCAAGGAAGCCAGGGAAGACAGAGCATTGACCAACTTCAGCAGGAAATATCTCTTTTGAGTCAGTTTGAACACGAGAACATAGTTCAATATTTTGGCACAGACAAGGACAAAAGTACACTATACATCTTCCTTGAGCTTGTAACCAAAGGGTCATTGGCAAGACTCTATCAAAAATATCGTCTAAGGGATTCTCAAGTTTCTTCATACACAAGGCAGATTTTAAGTGGCTTAAAGTATCTTCATGAGCGTAATGTGGTTCACAGGGACATCAAGTGTGCTAATATATTGGTTGACGCAAATGGATCAGTAAAGCTTGCTGATTTTGGGTTGGCCAAGGCAACCAATATGAATTATGTTAAATCAAGCAAAGGCTCCCCATATTGGATGGCCCCTGAGGTTGTTAATTTAAGAAACCGTGGTTATGGGCTAGAAGCTGATATATGGAGCTTGGGATGTACAGTTTTAGAGATGTTGACACGGCAGCCTCCCTACTCCCATTTGGAAGGAATGCAAGCATTGTTTCGGATTGGTAGGGGTGAACCTCCACCTGTTCCTGAATCTTTATCAAAAGATGCCAGAGATTTCATTCTTAAGTGCCTACAAGTTAATTCAAAAAAAAGGCCAACTGCAGTCCAGTTATTGGATCATCCCTTTGTGAAGAGGCCGCTTCTATCTCCCATAAGTCCTGCATCTCCGCATATCAATAATCTAAGGTTTTGA 1665 0.4505 MEDAKRKHLKPKLERRNAMKNINYHVPSSIAPFDDTSSNLRTHSLDLSPSLEHQTSFRVKGIDGEFDLIFRSLGLSGPDDFAIPTAAWEAQKARSRLSLEKKVEDEKSAKFETGAGIHSDIKSKTESFVISPRDEGKVDVSFDSKPLRYNKDGGGGIKGVRPPVLSPPPVMLPPLLDEVSSTWDLLKSLADGVVDTPIRDGGVSASGEEDDRGVEENEGVDRGIDSDMRHEESNLLSDSSSFTSHEDDESDAGGNKVSGGVDDSVYNVSPNGSFRRIFNSWQKGEILGKGSFGTVYEGFTDDGFFFAVKEVSLLDQGSQGRQSIDQLQQEISLLSQFEHENIVQYFGTDKDKSTLYIFLELVTKGSLARLYQKYRLRDSQVSSYTRQILSGLKYLHERNVVHRDIKCANILVDANGSVKLADFGLAKATNMNYVKSSKGSPYWMAPEVVNLRNRGYGLEADIWSLGCTVLEMLTRQPPYSHLEGMQALFRIGRGEPPPVPESLSKDARDFILKCLQVNSKKRPTAVQLLDHPFVKRPLLSPISPASPHINNLRF 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1268 554 FunFam Mitogen-activated protein kinase 1, putative, expressed 279 547 - -
Glsi03g1268 554 ProSiteProfiles Protein kinase domain profile. 281 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1268 554 Pfam Protein kinase domain 282 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1268 554 SMART serkin_6 281 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1268 554 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 176 539 - -
Glsi03g1268 554 ProSitePatterns Protein kinases ATP-binding region signature. 287 309 IPR017441 GO:0005524
Glsi03g1268 554 Gene3D Transferase(Phosphotransferase) domain 1 279 548 - -
Glsi03g1268 554 MobiDBLite consensus disorder prediction 196 262 - -
Glsi03g1268 554 MobiDBLite consensus disorder prediction 204 234 - -
Glsi03g1268 554 SUPERFAMILY Protein kinase-like (PK-like) 267 547 IPR011009 -
Glsi03g1268 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 400 412 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1268 Glsi-ChrGlsi03 74713702 74718289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1268 7 95 MAP Kinase Kinase Kinase AT4G08500 46.316 4.69e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Glsi03g1268 Pkinase 4e-71 CL0016