Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1267 ATGGGGAGAGAAGAAGAAGAAGCAGACACAGAGATGGGAATTGATCTCTCTTTGAAAATAGATACTGAACAAAAAGAGGAAGAAGAAGAAGAAGAAAGAGTAGATGCGCAGGTTGAAGAAGATCATGACGATGATGAGGAAGAGAAGGAAGAAGAAACTCCTGAAGTCACAGCAGGCGAAGTAGAAGATGATGCATCAATGGTGGAAATTTCTCTCGAAGAAAACACAAAAGCAAGAGAGGATTTAAGTGTCTTACAAACGGAAATGGATCGCATGAAAGAGGAAAACAAGGTTTTGAGGAAAGTAGTAGAGAAAACAATGAAAGATTACTATGATCTTCAGATGAAATTTGCAGTCATCCAGCAGAACAATAATTATAGAAGGAAGGATTCTCAAATTTCTCTCTCATCACTTCAAGAAAATCATACAAATATCAGTGAAGAAGGACCACCGACGTCGACTATTCCAGAAACTAGTATTAGTGAGAGTGATTTGGGATTATCACTAAGGTTACAAACAAGTACAAGTAGTCAAGTACAAGAAAGGGATGAAGATCATAAAGAAGACAATAATAAGGAAGAATTGGCAAGTTTTGCAGTAACATCATCGGTGGAAAACAAGTCACATCAGATTAATGATCATCACTTGCCTCGTGGTATTTTCAACTCCCATGTTGCCTCTCCTCCTAATAGAAAGGCTAGGGTTTCAGTTAGAGCAAGATGTGACACAGCCACAATGAATGATGGGTGTCAATGGAGGAAATATGGACAGAAAATTGCAAAAGGGAATCCATGCCCTCGCGCCTACTATCGATGCACCGTGGCCCCAGGTTGCCCAGTTAGGAAGCAGGTACAAAGATGCTTAGAGGACACGTCCATACTAATTACAACCTATGAAGGAACACACAACCATCCACTACCTGTGGGTGCAACTGCCATGGCTTCCACAGCTTCTGCAGCAGCTTCCTTTATGCTACTAAACTCAAGCAACCCCATCTCAAATGGTATAAACCCTAATTACAATAGCTTCCACCCTTTGAACCCAGCTTCTTATATCACAAGCATAAACCCTGATGACCCTTCTAAAGGGGTCGTCTTTGATCTCACAAATAATAACACCAATGACCCCCCACCACCATGTTTTCCTACCACCAACTCCACAGCTCAACCAGGATTTTCTTGGATGCCAAACAGACAAATGAACAATTTTCCCAGCCATAGAACGGTGGATCATGAGAGGGTTGGAAAAGCAGAAGAAAATAATAATGTGTCAGCCATTGCCTCAGATCCTAAGTTTAGGGTTGCTGTAGCAGCAGCCATAACTTCACTTATCAATAAAGAGAATAATCCTATAGGGACTTCTTCTTTTGGCCCTAGGAATGATCAGAACAATGGTGGCTCCAGTAGCAAAAATTGGGTCATTGAATCTCTCTCATCAAAAGGTAAGACCACTTGA 1455 0.4124 MGREEEEADTEMGIDLSLKIDTEQKEEEEEEERVDAQVEEDHDDDEEEKEEETPEVTAGEVEDDASMVEISLEENTKAREDLSVLQTEMDRMKEENKVLRKVVEKTMKDYYDLQMKFAVIQQNNNYRRKDSQISLSSLQENHTNISEEGPPTSTIPETSISESDLGLSLRLQTSTSSQVQERDEDHKEDNNKEELASFAVTSSVENKSHQINDHHLPRGIFNSHVASPPNRKARVSVRARCDTATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDTSILITTYEGTHNHPLPVGATAMASTASAAASFMLLNSSNPISNGINPNYNSFHPLNPASYITSINPDDPSKGVVFDLTNNNTNDPPPPCFPTTNSTAQPGFSWMPNRQMNNFPSHRTVDHERVGKAEENNNVSAIASDPKFRVAVAAAITSLINKENNPIGTSSFGPRNDQNNGGSSSKNWVIESLSSKGKTT 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1267 484 Coils Coil 19 40 - -
Glsi03g1267 484 SMART WRKY_cls 246 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi03g1267 484 Coils Coil 75 109 - -
Glsi03g1267 484 Gene3D WRKY domain 230 308 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi03g1267 484 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 52 461 IPR044810 GO:0003700
Glsi03g1267 484 MobiDBLite consensus disorder prediction 24 59 - -
Glsi03g1267 484 Pfam WRKY DNA -binding domain 247 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi03g1267 484 MobiDBLite consensus disorder prediction 447 484 - -
Glsi03g1267 484 MobiDBLite consensus disorder prediction 172 191 - -
Glsi03g1267 484 ProSiteProfiles WRKY domain profile. 241 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi03g1267 484 FunFam probable WRKY transcription factor 31 231 308 - -
Glsi03g1267 484 MobiDBLite consensus disorder prediction 1 77 - -
Glsi03g1267 484 SUPERFAMILY WRKY DNA-binding domain 239 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi03g1267 484 MobiDBLite consensus disorder prediction 140 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1267 Glsi-ChrGlsi03 74702496 74705548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1267 12 363 WRKY Transcription Factor Family AT1G68150 46.995 1.09e-82 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi03g1267 WRKY 1.5e-24 CL0274