Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1265 ATGTGCCGAGGCGACGTCTCCCATGATGTTTGTGAAGATTGTGTAGCAAATGTAATCCAACAAGTAGCCACAGAGTGTCTGTACAGCAAAGACGCCATTCTTTGGTATGATGAGTGCTTAGTTCGCTATTCCAACCATTCTTTTTTCTCCACCCTGGACTTCGGCGAACTGTTTCCAGTTTATATTGTCCAGGAAAATGTGAATATGTCAGACCAGAAAATGCTCATTTGGACATTAGAAGAGACGTTGCAACAGTTGATAGCGGCTGCCAAATTAGGAAAAGGGAAAGGACAACCACGAAGGATTATTATGGTTGTAGTCCCCATTGTTGCTTCCTTCATAATTTTTTGTTTCACCTACTACTTCTTACAGAGAATAAAGAGGAACAGTTACAAGACTATTCTACGAGAAAACTTTGGAACTGAAAGCGCCACTTTAGAGTCCTTGCAATTCAGTTTGGCCACCATCGAAGCCGCAACAAATAAGTTTTCACACGAGAATAAAATAGGCAAAGGTGGATTCGGAGTTGTTTACAAGGGAATTCTTTCTGATGGACGAGAAATAGCAGTAAAGAGACTCTCAAAAACCTCAGGACAAGGTTCCCAAAAAAGAAGACTATTAAATTGGCCAGAGCGTTATAAAATTATAGGAGAAATTGCTGCAGGAATTCTTTATCTTCACGAGTATTCTCGCCTTAAAATAATCTATCGCGATCTCAAACCTAGCAATATTTTGCTAGATGACACCATGAATCCAAAAATATCAGATTTTGGCATGGCCAAGCATGTTGCCATAGATGCAAACCAAGGAAGTACTAACATAATTGTTGGAACATAG 837 0.3978 MCRGDVSHDVCEDCVANVIQQVATECLYSKDAILWYDECLVRYSNHSFFSTLDFGELFPVYIVQENVNMSDQKMLIWTLEETLQQLIAAAKLGKGKGQPRRIIMVVVPIVASFIIFCFTYYFLQRIKRNSYKTILRENFGTESATLESLQFSLATIEAATNKFSHENKIGKGGFGVVYKGILSDGREIAVKRLSKTSGQGSQKRRLLNWPERYKIIGEIAAGILYLHEYSRLKIIYRDLKPSNILLDDTMNPKISDFGMAKHVAIDANQGSTNIIVGT 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1265 278 ProSiteProfiles Gnk2-homologous domain profile. 1 48 IPR002902 -
Glsi03g1265 278 FunFam Os07g0541700 protein 197 278 - -
Glsi03g1265 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Glsi03g1265 278 ProSitePatterns Protein kinases ATP-binding region signature. 169 191 IPR017441 GO:0005524
Glsi03g1265 278 Gene3D Transferase(Phosphotransferase) domain 1 204 278 - -
Glsi03g1265 278 Gene3D Phosphorylase Kinase; domain 1 141 203 - -
Glsi03g1265 278 Gene3D - 1 48 IPR038408 -
Glsi03g1265 278 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 202 - -
Glsi03g1265 278 ProSiteProfiles Protein kinase domain profile. 86 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1265 278 Pfam Salt stress response/antifungal 1 45 IPR002902 -
Glsi03g1265 278 SUPERFAMILY Protein kinase-like (PK-like) 151 278 IPR011009 -
Glsi03g1265 278 Pfam Protein kinase domain 211 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1265 Glsi-ChrGlsi03 74664929 74666616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1265 2 278 Receptor kinase-like Gene Family AT4G23190 34.545 5.35e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi03g1265 Pkinase 1.1e-13 CL0016