Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1254 ATGGCGTCGTCGAAGTTGGTCACGACGAATCCGGATCTGCCACGCCAATCTTCTATATGTTCCCTTTCTACCATCCTCGCCGATCTCCAACACAACACCTGTAACCCCAACACCAACAACCACGACGACCAACACCACGTCGACGACGACCCTTCCAAGACCTTGGGTTCCATGAGTATGGATGACCTCCTCAAGTCCATTTACTCTTCCTCTGCCTCCGAACCCAATCCCAACCCGACTCACCTCCCCCCGGACCCCAATTTCCACCCCGACGGTGTACCCTCCTCCCTGTCTAGCCAGGGGAGCTTCTCGTTCCCCAAGGAAATGGGCACCAAGACGGCGGAGGAAGTGTGGCAGGAGATGGTGGAGGGTGGTGGTGATCAGAGGAGGGTGATGGCTCCTGCAGGGGAGGGTCTGGAGGGGATTACTTTGGAGGATTTCTTGGCCAAGGCTGGGGCTGTCAGAGAGGAGGATGTCAGAGGGGGGGTTCCTACCGTAGGGCCAGGCCCTGGCAGTTACCGTGTGGACCCCGCGACGGCGGTGGCGATCAACGGTGGTGCTCAGTTCCCGATGCCGGGGCAGGTTAAGGAAGGGTCGTCCATGGAGGCTTTTGGAAATGGGATGGACGGGACAGTTGTTGGAGTAGCAGCATCGGGAAGGGGAAAGAGGAGGGTTGTGGAGGAACCCGTCGATAAGGCTACGCTTCAGAAGCAGAGAAGGATGATCAAAAACAGAGAGTCTGCGGCCAGGTCCAGGGAACGCAAGCAGGCTTACACAAATGAGCTAGAGTCTATGGTAACACAGCTGGGGGAAGAGAATGAACTACTATTGAAGGAAGAGGCTGAAAGGAAGAAGCAGAGGTACAAACAGCTCATGACATACCTTATTCCAGTTGTGGAGAAGCGAAAACCACCACGTAAGCTTCGAAGAGTGAATTCATTCTAG 945 0.5556 MASSKLVTTNPDLPRQSSICSLSTILADLQHNTCNPNTNNHDDQHHVDDDPSKTLGSMSMDDLLKSIYSSSASEPNPNPTHLPPDPNFHPDGVPSSLSSQGSFSFPKEMGTKTAEEVWQEMVEGGGDQRRVMAPAGEGLEGITLEDFLAKAGAVREEDVRGGVPTVGPGPGSYRVDPATAVAINGGAQFPMPGQVKEGSSMEAFGNGMDGTVVGVAASGRGKRRVVEEPVDKATLQKQRRMIKNRESAARSRERKQAYTNELESMVTQLGEENELLLKEEAERKKQRYKQLMTYLIPVVEKRKPPRKLRRVNSF 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1254 314 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 239 254 IPR004827 GO:0003700|GO:0006355
Glsi03g1254 314 Pfam bZIP transcription factor 233 289 IPR004827 GO:0003700|GO:0006355
Glsi03g1254 314 SUPERFAMILY Leucine zipper domain 236 287 IPR046347 GO:0003700|GO:0006355
Glsi03g1254 314 CDD bZIP_plant_BZIP46 236 268 - -
Glsi03g1254 314 SMART brlzneu 232 294 IPR004827 GO:0003700|GO:0006355
Glsi03g1254 314 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 14 289 IPR043452 GO:0003700|GO:0045893
Glsi03g1254 314 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 234 286 IPR004827 GO:0003700|GO:0006355
Glsi03g1254 314 Gene3D - 236 292 - -
Glsi03g1254 314 MobiDBLite consensus disorder prediction 92 107 - -
Glsi03g1254 314 MobiDBLite consensus disorder prediction 35 110 - -
Glsi03g1254 314 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 235 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1254 Glsi-ChrGlsi03 74599265 74602831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1254 112 314 bZIP Transcription Factor Family AT5G44080 48.077 2.39e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi03g1254 bZIP_1 2.8e-13 CL0018