Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1248 ATGGCAGCCACCGAAACAAAGACGAAGAAAGTGTGGAAGGTGGTGAATGAGCTGAAGCCAGCCATGGCGATGGTGATGGTGGTGACTGCGTTGGCTGCTGCCACTGTGCTTTACAAGCTCGCTATCGATGATGGCATGAACTTTGCCGTCGTCAATGCTTACCGTTACATGTTTGCTTCCTCTTTCATGGTTCCTCTGGCTTTTTTACACGAAAGGGGAAGTGTATTTCAAAACCTATACTTGGAGAGCCTGGTTTTGACTACAGCAACGTTTGTTTCTGCGTCCTTTAACCTTATTCCAGCCATCACCTTCGTCTTGGCTATCACTTTTGGTTTGGAAAAATTAAATTGGGGAGCAGCAGCAGGGAAGGCTAAGATGATAGGAACCATAACTGGAATTGGAGGGGCAATGGTGATGACTTTTGTAAAAGGCGTAGAAATTAACATTTGGTCTTCTTCTCTACGTCGCCACCACAATGCCCACGCGGCACACCAAAACGCAAGTGTTGGACAACGAATAGCTGGTGTCGTTTGTGCCCTTGCCAGCTGCGTCTCTTTTTCTGTCTGGATCATCATTCAGGGTAAGATGAGTGAAAATGCGAAAAAATATCCCAGCCATCGCGCAAATACAGCCCTGATGTGTACAATGGCAGCAATACAATCCACAGTTTTTGCTCTGTGCTTTGAAAGGGATTGGAGCCAGTGGAAATTGGGTTGGAATATTCGGCTTCTAACTGTCGTTTATTCGGGAATCGTGGCCTCTGGATTCATGGTGATTGCCATTGCATGGTGTGTGGAAAAGAGGGGTCCACTGTTTACCGTTATTTTCAACCCTTTAATGCTTCTGCTTGTGGCTCTTGCCAGTTCTTTGGTACTGGATGAGCAGCTCTACCTAGGAAGTGTGCTTGGGGGTGTGTTGGTAGTGTTTGGTTTGTACATGGTGATATGGGGTAAGGGAAAAGAGGCCAAAGCCAGGACTCGATCAGAGCTACCATTGCCATTACAACAAATCTCCCAAGAACCTCAAGTTGTTGACACTCCTAAGAACCAAGAACATGAGGAACCTAGCAAGGACAAACAAGAAAACCCAGTTTCTAGCTGCAATACTAATGGCGGTGGTGCAGTTTGTATATGCTGGCATGGGGTGAATGTCTTGTTCAAATTGGTAGCAAATGATGGAATGAGCTTGAGTGCTGTTATTGCCTACAGGTTCATCTTTGCTACCATCTTCATTCTTCCACTTCCACTTGCTCTCTTCTTTGAAAGGGGATCCTGCCTTGGTATCTCCTACATATGCTACGACAATGTTGAATCTCATTCCAGCTGTCACCTTCGTACTGGCTACCTCCCTTGGATTGGAGAGGATGAATCTTGGAACGCCAGAGGCAAAAGGATCTGCATCTGGTCAACTAATGTTGACGTGATGGACCACGTGGCATCATCACATGGCGCCACTACTTCTCGCTTATGGTGCTGCATGCTACCTCTGGGGGATATTGGCCTCTGGGATGGTTTGTACGTACCCTAA 1527 0.4669 MAATETKTKKVWKVVNELKPAMAMVMVVTALAAATVLYKLAIDDGMNFAVVNAYRYMFASSFMVPLAFLHERGSVFQNLYLESLVLTTATFVSASFNLIPAITFVLAITFGLEKLNWGAAAGKAKMIGTITGIGGAMVMTFVKGVEINIWSSSLRRHHNAHAAHQNASVGQRIAGVVCALASCVSFSVWIIIQGKMSENAKKYPSHRANTALMCTMAAIQSTVFALCFERDWSQWKLGWNIRLLTVVYSGIVASGFMVIAIAWCVEKRGPLFTVIFNPLMLLLVALASSLVLDEQLYLGSVLGGVLVVFGLYMVIWGKGKEAKARTRSELPLPLQQISQEPQVVDTPKNQEHEEPSKDKQENPVSSCNTNGGGAVCICWHGVNVLFKLVANDGMSLSAVIAYRFIFATIFILPLPLALFFERGSCLGISYICYDNVESHSSCHLRTGYLPWIGEDESWNARGKRICIWSTNVDVMDHVASSHGATTSRLWCCMLPLGDIGLWDGLYVP 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1248 508 PANTHER WAT1-RELATED PROTEIN 19 328 IPR030184 GO:0016020|GO:0022857
Glsi03g1248 508 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 320 - -
Glsi03g1248 508 MobiDBLite consensus disorder prediction 346 360 - -
Glsi03g1248 508 MobiDBLite consensus disorder prediction 343 366 - -
Glsi03g1248 508 Pfam EamA-like transporter family 175 315 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1248 Glsi-ChrGlsi03 74516621 74526604 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1248 9 370 Nodulin-like Gene Family AT1G68170 35.417 7.78e-77 244